afernandezody
Member
Hello,
The app compiles with Intel MPI but running it results in an error (9). The rsl error file reads
I'm trying to modify the configuration file but the problem is that the suggested link (http://www.intel.com/support/performancetools/sb/cs-028607.htm) is broken so it's unclear where to seek for help with the compilation flags. My only attempt has been to modify DM_FC and DM_CC pointing directly to the MPI compilers but it hasn't made any difference.
Thanks.
The app compiles with Intel MPI but running it results in an error (9). The rsl error file reads
Code:
taskid: 0 hostname: benchwrf0064
module_io_quilt_old.F 2931 F
Quilting with 1 groups of 0 I/O tasks.
Ntasks in X 8 , ntasks in Y 8
*************************************
Configuring physics suite 'conus'
mp_physics: 8
cu_physics: 0*
ra_lw_physics: 4
ra_sw_physics: 4
bl_pbl_physics: 2
sf_sfclay_physics: 2
sf_surface_physics: 2
(* = option overrides suite setting)
*************************************
WRF V4.1 MODEL
*************************************
Parent domain
ids,ide,jds,jde 1 1500 1 1500
ims,ime,jms,jme -4 195 -4 195
ips,ipe,jps,jpe 1 188 1 188
*************************************
DYNAMICS OPTION: Eulerian Mass Coordinate
alloc_space_field: domain 1 , 1275365112 bytes allocated
med_initialdata_input: calling input_input
Input data is acceptable to use: wrfinput_d01
Timing for processing wrfinput file (stream 0) for domain 1: 186.54788 elapsed seconds
Max map factor in domain 1 = 1.12. Scale the dt in the model accordingly.
INPUT LandUse = "MODIFIED_IGBP_MODIS_NOAH"
LANDUSE TYPE = "MODIFIED_IGBP_MODIS_NOAH" FOUND 33 CATEGORIES 2 SEASONS WATER CATEGORY = 17 SNOW CATEGORY = 15
INITIALIZE THREE Noah LSM RELATED TABLES
Skipping over LUTYPE = USGS
LANDUSE TYPE = MODIFIED_IGBP_MODIS_NOAH FOUND 20 CATEGORIES
INPUT SOIL TEXTURE CLASSIFICATION = STAS
SOIL TEXTURE CLASSIFICATION = STAS FOUND 19 CATEGORIES
ThompMP: computing qr_acr_qg
Writing qr_acr_qg.dat in Thompson MP init
ThompMP: computing qr_acr_qs
Writing qr_acr_qs.dat in Thompson MP init
ThompMP: computing freezeH2O
Writing freezeH2O.dat in Thompson MP init
wrf.exe: /home/odyhpc/netcdf-c/libsrc/posixio.c:293: px_pgout: Assertion `*posp == OFF_NONE || *posp == lseek(nciop->fd, 0, SEEK_CUR)' failed.
forrtl: error (76): Abort trap signal
Image PC Routine Line Source
wrf.exe 000000000303537B for__signal_handl Unknown Unknown
libpthread-2.27.s 00007F26D5021890 Unknown Unknown Unknown
libc-2.27.so 00007F26D48BEE97 gsignal Unknown Unknown
libc-2.27.so 00007F26D48C0801 abort Unknown Unknown
libc-2.27.so 00007F26D48B039A Unknown Unknown Unknown
libc-2.27.so 00007F26D48B0412 Unknown Unknown Unknown
libnetcdf.so.18 00007F26D6BEFF7C Unknown Unknown Unknown
libnetcdf.so.18 00007F26D6BF0B76 Unknown Unknown Unknown
libnetcdf.so.18 00007F26D6BF0D78 Unknown Unknown Unknown
libnetcdf.so.18 00007F26D6BEDB63 ncio_get Unknown Unknown
libnetcdf.so.18 00007F26D6BBFD91 Unknown Unknown Unknown
libnetcdf.so.18 00007F26D6BD1D49 Unknown Unknown Unknown
libnetcdf.so.18 00007F26D6BD327E NC3_put_vara Unknown Unknown
libnetcdf.so.18 00007F26D6BA0235 Unknown Unknown Unknown
libnetcdf.so.18 00007F26D6BA1AD4 nc_put_vara_float Unknown Unknown
libnetcdff.so.6.1 00007F26D6EB0070 nf_put_vara_real_ Unknown Unknown
wrf.exe 0000000003018EE5 Unknown Unknown Unknown
wrf.exe 00000000030087DD Unknown Unknown Unknown
wrf.exe 0000000003006ECB Unknown Unknown Unknown
wrf.exe 00000000014D415D Unknown Unknown Unknown
wrf.exe 00000000014CFAF1 Unknown Unknown Unknown
wrf.exe 00000000014CE42E Unknown Unknown Unknown
wrf.exe 00000000014CD9ED Unknown Unknown Unknown
wrf.exe 00000000014CD5C5 Unknown Unknown Unknown
wrf.exe 0000000001975CA3 Unknown Unknown Unknown
wrf.exe 00000000019757A0 Unknown UnThanks.