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SIGTERM problem

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Sergiosf

New member
Hello wrf users :D
It's my first time on wrf-forum,I've recently started working with WRF and still a lot of things are unknown for me.
Till the moment I learned with the tutorial and User's guide, which helps me a lot, but now I found a trouble in the last step, just when I thought that I had this program under control. I've tried everything in the namelist.input but still finding the same problem which I attached here.
Do you have any idea?
Thank you very much.
Kind Regards.
Sergio.
 

Attachments

  • rsl.error.0000.txt
    3.2 KB · Views: 62
Please upload your namelist.input for me to take a look. Also, please tell me how you compile and run the model.
 
Hello.
Thank you for helping me.
This is my namelist.input:
&time_control
run_days = 7,
run_hours = 0,
run_minutes = 0,
run_seconds = 0,
start_year = 1979, 1979,
start_month = 01, 01,
start_day = 01, 01,
start_hour = 0, 0,
start_minute = 0, 0,
start_second = 0, 0,
end_year = 1979, 1979,
end_month = 01, 12,
end_day = 08, 31,
end_hour = 00, 18,
end_minute = 0, 0,
end_second = 0, 0,
interval_seconds = 21600,
input_from_file = .true.,.true.,
history_interval = 360, 360,
frames_per_outfile = 1000, 1000,
restart = .F.,
restart_interval = 263520,
io_form_history = 2,
io_form_restart = 2,
io_form_input = 2,
io_form_boundary = 2,
debug_level = 0,
auxinput4_inname = 'wrflowinp_d<domain>',
auxinput4_interval = 360, 360,
io_form_auxinput4 = 2,
auxhist3_outname = 'wrfxtrm_d<domain>_<date>',
! auxhist4_outname = 'wrfrain_d<domain>_<date>',
! auxhist5_outname = 'wrf24hc_d<domain>_<date>',
ignore_iofields_warning = .FALSE.,
io_form_auxhist3 = 2,
! io_form_auxhist4 = 2,
! io_form_auxhist5 = 2,
output_diagnostics = 1,
auxhist3_interval = 1440, 1440,
! auxhist4_interval = 60,
! auxhist5_interval = 1440,
frames_per_auxhist3 = 1000, 1000,
! frames_per_auxhist4 = 1000,
! frames_per_auxhist5 = 1000,
! iofields_filename = 'iofields.txt',
/

&domains
time_step = 90,
time_step_fract_num = 0,
time_step_fract_den = 1,
max_dom = 1,
e_we = 130, 223,
e_sn = 133, 271,
e_vert = 27, 27
p_top_requested = 11000,
num_metgrid_levels = 27,
num_metgrid_soil_levels = 4,
dx = 30000, 10000,
dy = 30000, 10000,
grid_id = 1, 2,
parent_id = 1, 1,
i_parent_start = 1, 40,
j_parent_start = 1, 28,
parent_grid_ratio = 1, 3,
parent_time_step_ratio = 1, 3,
smooth_cg_topo = .true.,
feedback = 0,
smooth_option = 0,
/

&physics
mp_physics = 10, 6,
ra_lw_physics = 1, 3,
ra_sw_physics = 5, 3,
radt = 30, 30,
sf_sfclay_physics = 2, 1,
sf_surface_physics = 2, 2,
sf_lake_physics = 1,
bl_pbl_physics = 2, 1,
bldt = 0, 0,
cu_physics = 93, 3,
cudt = 5, 5,
fractional_seaice = 1,
seaice_threshold = 0,
isfflx = 1,
surface_input_source = 3,
num_soil_layers = 4,
sf_urban_physics = 0, 0, 0,
num_land_cat = 28,
sst_skin = 1,
sst_update = 1,
tmn_update = 1,
seaice_albedo_opt = 0,
seaice_albedo_default = 0.82,
seaice_snowdepth_opt = 0,
seaice_snowdepth_max = 1,
seaice_snowdepth_min = 0.001,
seaice_thickness_opt = 0,
seaice_thickness_default = 3.0,
usemonalb = .true.,
/

&fdda
/

&dynamics
w_damping = 1,
diff_opt = 1, 1,
km_opt = 4, 4,
diff_6th_opt = 0, 0,
diff_6th_factor = 0.12, 0.12,
base_temp = 290.0,
damp_opt = 3,
zdamp = 11000.0, 11000.0,
dampcoef = 0.003, 0.003,
khdif = 0, 0,
kvdif = 0, 0,
non_hydrostatic = .true., .true.,
moist_adv_opt = 1, 1, 1,
scalar_adv_opt = 1, 1, 1,
gwd_opt = 1,
max_rot_angle_gwd = 100,
/

&bdy_control
spec_bdy_width = 10,
spec_exp = 0.33
spec_zone = 1,
relax_zone = 9,
specified = .true., .false.,
nested = .false., .true.,
/

&grib2
/

&namelist_quilt
nio_tasks_per_group = 0,
nio_groups = 1,
/

And my rsl.error has changed a little bit, here is the new error, but is quite similar, I attached it.
I compile it by following this tutorial for my supercomputer building and compiling of WRF.https://www.ace-net.ca/wiki/WRF

I run the model with his script:
#$ -cwd
#$ -pe ompi* 24
#$ -l h_rt=80:0:0
#$ -l h_vmem=2G,
#$ -j y
#$ -M ssanchez@stfx.ca

date
source /home/sergiosf/scratch/librerias/librerias

mpirun -np 24 ./wrf.exe

date

tail rsl.error.0000.

That's all I thing, I use qsub to run that script in order to use the Nefelibata supercomputer server.
Thank you very much.
Thanks.
Sergiosf
 

Attachments

  • rsl.error.0000.txt
    5.5 KB · Views: 55
The model run about 30 minutes before it crashed. This often indicates something wrong in the physics.
Please save wrfout every time step before it crash, and examine these files. For example, can you find any NaN value?
You also need to look at other rsl files to find error message. Note that the error message doesn't necessarily show in rsl.error.0000
 
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