warning of index, unrecognized option in entry 10

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Lichao

New member
this is my (wrf_fire)index, I think it's right, but remind me there's a problem:
root@ubuntu:/home/cap/WPS-4.1# ./geogrid.exe
Parsed 22 entries in GEOGRID.TBL
Processing domain 1 of 3
WARNING: In /home/cap/geo_data/landFire/index, unrecognized option in entry 10.
WARNING: In /home/cap/geo_data/highres_elev/index, unrecognized option in entry 10.



ZSF index
projection = regular_ll
dx=0.00027777778
dy=0.00027777778
stand_lon=49.52
truelat1=-33.05
truelat2= 33.05
known_x=1.0
known_y=1.0
known_lat=-32.0678742
known_lon=149.517722
row_order = top_bottom
description = " 30m "
units = "meters"
type = continuous
signed = yes
scale_factor = 1.0
wordsize = 2
tile_x = 9750
tile_y = 9440
tile_z = 1
endian = little

NFUEL_CAT index
projection=regular_ll
type=categorical
category_min=1
missing_value=0.00
category_max=14
dx=0.00027777778
dy=0.00027777778
stand_lon=49.52
truelat1=-33.05
truelat2= 33.05
known_x=1.0
known_y=1.0
known_lat=-32.0678742
known_lon=149.517722
wordsize=1
tile_x=13139
tile_y=11833
tile_z=1
signed = yes
units="land_use"
scale_factor=1
description="land use data"
row_order = bottom_top
endian=little

GEOGRID.TBL
name = NFUEL_CAT
dest_type = categorical
interp_option = default:nearest_neighbor+average_16pt+search
abs_path = /home/cap/geo_data/landFire
priority = 1
fill_missing = 14
subgrid = yes
dominant_only = NFUEL_CAT
z_dim_name = fuel_cat
halt_on_missing = no
===============================
name = ZSF
dest_type = continuous
interp_option = default:average_gcell(4.0)+four_pt+average_4pt
abs_path = /home/cap/geo_data/highres_elev/
priority = 1
fill_missing = 0
smooth_option = smth-desmth_special; smooth_passes=1
subgrid = yes
df_dx = DZDXF
df_dy = DZDYF
halt_on_missing = no
===============================


So I don't know why I have this reminder. I hope I can get your help!!
At the same time, I don't think this reminder will affect me to run WRF, but copy the file to em_ Can't run after real. Are they directly related?
 

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Lichao

New member
this is my namelist.wps and namelist.input
 

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  • namelist.wps
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mgduda

Administrator
Staff member
The entry numbers in the geogrid warning messages can sometimes be misleading, so it may not be the 10th option in your 'index' files that is unrecognized. But, you can quickly identify the problematic option in your 'index' file by first commenting out all entries in your 'index' file with a # character at the beginning of each line. Running geogrid again, you should no longer see the "unrecognized option in entry 10" messages. Then, uncomment the lines in your 'index' file a few at a time until the "unrecognized option" message appears again. From there, it should be easy to check which of the options that was just uncommented is the problem.

When you've identified the option in your 'index' file that is problematic, you can consult the Description of index Options section in Chapter 3 of the ARW User's Guide to see if there's an option that you might have misspelled or otherwise specified incorrectly.
 

Ming Chen

Moderator
Staff member
I don't think the warnings will affect WRF run. this is because in your namelist.wps, you specify:
geog_data_res = 'default',

The default dataset will be used. Therefore, your data in geo_em are correct.
 

mgduda

Administrator
Staff member
Ming Chen said:
I don't think the warnings will affect WRF run. this is because in your namelist.wps, you specify:
geog_data_res = 'default',

The default dataset will be used. Therefore, your data in geo_em are correct.

I don't think the use of 'default' for the geog_data_res will guarantee correct results in all cases. For example, if I introduce a new field, FOO, with the following GEOGRID.TBL entry
Code:
===============================
name = FOO
        priority = 1
        dest_type = continuous
        interp_option = default:average_gcell(4.0)+four_pt+average_4pt
        abs_path = default:/glade/scratch/duda/foo
===============================
along with an index file for the FOO dataset in which one of the options is not correctly specified, e.g.,
Code:
type = continuous
signed = yes
projection = regular_ll
dx = 0.00833333
dy = 0.00833333
known_x = 1.0
known_y = 1.0
known_lat = -89.99583
known_lon = -179.99583
word_size = 4
tile_x = 1200
tile_y = 1200
tile_z = 1
tile_bdr=3
units="-"
description="Surface foo-ness"
(in this example, the "word_size" option should have been "wordsize")
then running geogrid.exe will produce the following warning
Code:
Parsed 51 entries in GEOGRID.TBL
Processing domain 1 of 2
WARNING: In /glade/scratch/duda/foo/index, unrecognized option  in entry 10.
and although I used the 'default' resolution for every field, the FOO field will probably not be correctly processed because geogrid will not have found the correct specification for the wordsize (i.e., the number of bytes used to store each pixel in the dataset).

So, I would strongly recommend finding the source of the warning and correcting it in the 'index' files for the NFUEL_CAT and ZSF datasets.
 

Lichao

New member
thanks!!
Now I'm stuck in the last part, that is, the operation of WRF. I've been debugging for a long time without success.
I also checked other people's same problems, but found that I changed it and failed to run real successfully, so I still need your help. Thank you.
  • rsl.error.0000
    taskid: 0 hostname: ubuntua
    module_io_quilt_old.F 2931 F
    Quilting with 1 groups of 0 I/O tasks.
    Ntasks in X 2 , ntasks in Y 4
    WRF V4.1.2 MODEL
    *************************************
    Parent domain
    ids,ide,jds,jde 1 60 1 60
    ims,ime,jms,jme -4 37 -4 22
    ips,ipe,jps,jpe 1 30 1 15
    *************************************
    DYNAMICS OPTION: Eulerian Mass Coordinate
    alloc_space_field: domain 1 , 25701576 bytes allocated
    -------------- FATAL CALLED ---------------
    FATAL CALLED FROM FILE: <stdin> LINE: 70
    program wrf: error opening wrfinput_d01 for reading ierr= -1021
    -------------------------------------------
    application called MPI_Abort(MPI_COMM_WORLD, 1) - process 0

namelist.wps
Code:
&share
 wrf_core = 'ARW',
 max_dom = 1,
 start_date = '2020-03-30_00:00:00',
 end_date   = '2020-03-30_12:00:00',
 interval_seconds = 21600
 io_form_geogrid = 2,

/

&geogrid
 parent_id         =   1,   
 parent_grid_ratio =   1,   
 i_parent_start    =   1,
 j_parent_start    =   1, 
 e_we              =   60,
 e_sn              =   60,
 geog_data_res     =  '0.01',
 dx                =  0.0001,
 dy                =  0.0001,
 map_proj          =  'lat-lon',
 ref_lat           =  27.817089,
 ref_lon           =  102.219150,  
 stand_lon         =  102.219150,
truelat1           =  27.817089,
truelat2           =  27.817089,
 geog_data_path =  '/home/cap/geo_data/'
/

&ungrib
 out_format = 'WPS',
 prefix = 'FILE',
/

&metgrid
 fg_name = 'FILE'
 io_form_metgrid = 2, 
/

namelist.input
Code:
 &time_control
 run_days                            = 0,
 run_hours                           = 12,
 run_minutes                         = 0,
 run_seconds                         = 0,
 start_year                          = 2020, 
 start_month                         = 03, 
 start_day                           = 30,  
 start_hour                          = 00,  
 start_minute                        = 00,  
 start_second                        = 00,   
 end_year                            = 2020, 
 end_month                           = 03,  
 end_day                             = 30,   
 end_hour                            = 12,   
 end_minute                          = 00,   
 end_second                          = 00,   
 interval_seconds                    =  21600
 history_interval_m                  = 60
 input_from_file                     = .true.,
 frames_per_outfile                  = 1000,
 restart                             = .false.,
 restart_interval                    = 1440,
 io_form_history                     = 2
 io_form_restart                     = 2
 io_form_input                       = 2
 io_form_boundary                    = 2
 debug_level                         = 0
 /

 &domains
 time_step                           = 100,
 time_step_fract_num                 = 0,
 time_step_fract_den                 = 1,
 max_dom                             = 1,
 e_we                                = 60,
 e_sn                                = 60,
 e_vert                              = 35, 
 eta_levels                          = 1.000, 0.993, 0.983, 0.970, 0.954,
                                       0.934, 0.909, 0.880, 0.845, 0.807,
                                       0.765, 0.719, 0.672, 0.622, 0.571,
                                       0.520, 0.468, 0.420, 0.376, 0.335,
                                       0.298, 0.263, 0.231, 0.202, 0.175,
                                       0.150, 0.127, 0.106, 0.088, 0.070,
                                       0.055, 0.040, 0.026, 0.013, 0.000
 num_metgrid_levels                  = 34,
 num_metgrid_soil_levels             = 4,
 dx                                  = 111.177,
 dy                                  = 111.177,
 grid_id                             = 1, 
 parent_id                           = 1,
 i_parent_start                      = 1, 
 j_parent_start                      = 1,
 parent_grid_ratio                   = 1, 
 parent_time_step_ratio              = 1, 
 feedback                            = 1,
 smooth_option                       = 0
 /

&physics
 mp_physics                          = 3,
 ra_lw_physics                       = 1,
 ra_sw_physics                       = 1,
 radt                                = 10,
 sf_sfclay_physics                   = 1,
 sf_surface_physics                  = 2,
 bl_pbl_physics                      = 1,
 bldt                                = 0,
 cu_physics                          = 0,
 cudt                                = 5,
 isfflx                              = 1,
 ifsnow                              = 0,
 icloud                              = 1,
 surface_input_source                = 1,
 num_soil_layers                     = 4,
 SF_URBAN_PHYSICS                    = 1,
 /


 &fdda
 /

 &dynamics
 w_damping                           = 0,
 diff_opt                            = 2,
 km_opt                              = 4,
 damp_opt                            = 1,
 base_temp                           = 290.
 zdamp                               = 5000.,
 dampcoef                            = 0.1,
 khdif                               = 0.,
 kvdif                               = 0.,
 non_hydrostatic                     = .true.,
 /

&fire 
 ifire                       =     1,                 
 fire_fuel_read              =    -1,             
 fire_fuel_cat               =     0,              

 fire_num_ignitions          =     1,              
 fire_ignition_start_lon1    =     102.219150,         
 fire_ignition_start_lat1    =    27.817089,            
 fire_ignition_end_lon1      =     27.817089,         
 fire_ignition_end_lat1      =    27.817089,          
 fire_ignition_radius1       =     5,              
 fire_ignition_start_time1   =     0,             
 fire_print_msg     = 1,
 fire_print_file    = 1,             
 /

 &bdy_control
 spec_bdy_width                      = 5,
 spec_zone                           = 1,
 relax_zone                          = 4,
 specified                           = .true.,
 nested                              = .false.,
 /

 &grib2
 /

 &namelist_quilt
 nio_tasks_per_group = 0,
 nio_groups = 1,
 /
 
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