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WRF crashes in RUC LSM with Goddard MP scheme

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C

cxyiyh

Member
Hello,
I'm using V 4.2 with the attached namelist.WRF fails before outputting the first time step in the RUC LSM scheme, with crash in surface energy budget.

Code: 
 &time_control
 run_days                            = 3,
 run_hours                           = 0,
 run_minutes                         = 0,
 run_seconds                         = 0,
 start_year                          = 2016, 2016, 2016,
 start_month                         = 04,   04,   04, 
 start_day                           = 22,   22,   22,
 start_hour                          = 00,   00,   00,
 start_minute                        = 00,   00,   00,
 start_second                        = 00,   00,   00,
 end_year                            = 2016, 2016, 2016,
 end_month                           = 04,   04,   04,
 end_day                             = 25,   25,   25,
 end_hour                            = 00,   00,   00,
 end_minute                          = 00,   00,   00,
 end_second                          = 00,   00,   00,
 interval_seconds                    = 21600,
 input_from_file                     = .true.,.true.,.true.,
 history_interval                    = 360,  180,  90
 frames_per_outfile                  =   1,    1,  1,
 restart                             = .false.,
 restart_interval                    = 100000,
 io_form_history                     = 2,
 io_form_restart                     = 2,
 io_form_input                       = 2,
 io_form_boundary                    = 2,
 debug_level                         = 100,

 io_form_auxinput5                   = 2,
 io_form_auxinput7                   = 2,
 io_form_auxinput8                   = 2,

 auxinput5_inname                    = 'wrfchemi_d<domain>_<date>',
 auxinput7_inname                    = 'wrffirechemi_d<domain>_<date>',
 auxinput8_inname                    = 'wrfchemi_gocart_bg_d<domain>_<date>',
 auxinput5_interval_m                = 14400,14400,14400,
 auxinput7_interval_m                = 14400,14400,14400,
 auxinput8_interval_m                = 14400,14400,14400,

 frames_per_auxinput5                = 1, 1, 1,
 frames_per_auxinput7                = 1, 1, 1,
 frames_per_auxinput8                = 1, 1, 1,
/

 &dfi_control
/

 &domains
 time_step                           = 90,
 time_step_fract_num                 = 0,
 time_step_fract_den                 = 1,
 max_dom                             = 3,
 s_we                                = 1,      1,      1,
 e_we                                = 230,181,181,
 s_sn                                =  1,     1,      1,
 e_sn                                = 180,151,151,
 e_vert                              = 34,    34,     34,
 num_metgrid_levels                  = 27,
 num_metgrid_soil_levels             =  4,
 dx                                  = 27000, 9000,  3000,
 dy                                  = 27000, 9000,  3000,
 grid_id                             = 1,     2,      3, 
 parent_id                           = 1,     1,      2,
 i_parent_start                      = 1,     83,       55,
 j_parent_start                      = 1,     65,       54, 
 parent_grid_ratio                   = 1,     3,        3,
 parent_time_step_ratio              = 1,     3,        3,
 p_top_requested                     = 5000,
 feedback                            = 1,
 smooth_option                       = 0
 zap_close_levels                    = 50
 interp_type                         = 1
 t_extrap_type                       = 2
 force_sfc_in_vinterp                = 0
 use_levels_below_ground             = .true.
 use_surface                         = .true.
 lagrange_order                      = 1
 /

 &physics
 mp_physics                          = 10,    10,     10,  
 progn                               = 0,     0,   0,
 ra_lw_physics                       = 4,     4,   4,
 ra_sw_physics                       = 4,     4,   4,
 radt                                = 30,    30,   30,
 sf_sfclay_physics                   = 1,     1,    1,
 sf_surface_physics                  = 3,     3,     3,
 bl_pbl_physics                      = 1,     1,     1,
 bldt                                = 0,     0,     0,
 cu_physics                          = 3,     0,     0,
 cu_diag                             = 1,     0,     0,
 cudt                                = 5,     5,     5,
 ishallow                            = 0,
 isfflx                              = 1,
 ifsnow                              = 1,
 icloud                              = 1,
 surface_input_source                = 1,
 num_soil_layers                     = 4,
 sf_urban_physics                    = 0,     0,     0,
 mp_zero_out                         = 2,
 mp_zero_out_thresh                  = 1.e-12
 maxiens                             = 1,
 maxens                              = 3,
 maxens2                             = 3,
 maxens3                             = 16,
 ensdim                              = 144,
 cu_rad_feedback                     = .true.,
 num_land_cat			     = 21,
 /

 &fdda
 /

 &dynamics
 rk_ord                              = 3,
 w_damping                           = 0,
 diff_opt                            = 1,	1,	1,
 km_opt                              = 4,	4,	4,
 diff_6th_opt                        = 0,	0,	0,
 diff_6th_factor                     = 0.12,	0.12,	0.12,
 base_temp                           = 290.
 damp_opt                            = 0,
 zdamp                               = 5000.,  5000.,  5000.,
 dampcoef                            = 0.2,   0.2,  0.2,
 khdif                               = 0,      0,    0,
 kvdif                               = 0,      0,    0,
 non_hydrostatic                     = .true., .true., .true.,
 moist_adv_opt                       = 2,      2,     2,
 scalar_adv_opt                      = 2,      2,    2,
 chem_adv_opt                        = 2,      2,     2,
 tke_adv_opt                         = 2,      2,      2,
 time_step_sound                     = 4,      4,      4,
 h_mom_adv_order                     = 5,      5,      5,
 v_mom_adv_order                     = 3,      3,      3,
 h_sca_adv_order                     = 5,      5,     5,
 v_sca_adv_order                     = 3,      3,     3,
 /

 &bdy_control
 spec_bdy_width                      = 5,
 spec_zone                           = 1,
 relax_zone                          = 4,
 specified                           = .true., .false., .false.,
 nested                              = .false.,.true., .true.,
 /

 &grib2
 /

&chem
 kemit                               = 1,
 chem_conv_tr                        = 1,    0,  0,
 chem_opt                            = 8,	8,	8,
 bioemdt                             = 30,	30,	30,
 photdt                              = 30,	30,	30,
 chemdt                              = 1.5,	1.5,	1.5,
 io_style_emissions                  = 2,
 emiss_opt                           = 5,       5,	5,
 emiss_inpt_opt                      = 1,       1,      1,
 emiss_opt_vol                       = 0,       0,	0,
 emiss_ash_hgt                       = 20000.,
 chem_in_opt                         = 0,          0,	0,
 phot_opt                            = 1,          1,	1,	
 gas_drydep_opt                      = 1,          1,	1,
 aer_drydep_opt                      = 1,        1,	1,
 bio_emiss_opt                       = 0,          0,	0,
 ne_area                             = 0,
 dust_opt                            = 3,
 dmsemis_opt                         = 1,  
 seas_opt                            = 1,
 depo_fact                           = 0.25,
 gas_bc_opt                          = 1,          1,	1,
 gas_ic_opt                          = 1,          1,	1,
 aer_bc_opt                          = 1,          1,	1,
 aer_ic_opt                          = 1,          1,	1,	
 gaschem_onoff                       = 1,          1,	1,
 aerchem_onoff                       = 1,          1,	1,
 wetscav_onoff                       = 0,          0,	0,
 cldchem_onoff                       = 0,          0,	0,
 vertmix_onoff                       = 1,          1,	1,
 conv_tr_wetscav                     = 1,          0,	0,
 conv_tr_aqchem                      = 0,          0,	0,
 biomass_burn_opt                    = 1,          1,	1,
 plumerisefire_frq                   = 30,         30,	30,
 have_bcs_chem                       = .false., .false., .false.,
 aer_ra_feedback                     = 1,          1,	1,
 aer_op_opt                          = 1,          1,	1,
 opt_pars_out                        = 1,
 diagnostic_chem                     = 0,          0,	0,
/

 &namelist_quilt
 nio_tasks_per_group = 0,
 nio_groups = 1,
 /

==> rsl.error.0008 <==
d01 2014-04-22_12:15:00 calling inc/HALO_EM_PHYS_A_inline.inc
d01 2014-04-22_12:15:00 Top of Radiation Driver
d01 2014-04-22_12:15:00 calling inc/HALO_PWP_inline.inc
d01 2014-04-22_12:15:00 in SFCLAY
d01 2014-04-22_12:15:00 in RUC LSM
-------------- FATAL CALLED ---------------
FATAL CALLED FROM FILE: module_sf_ruclsm.b LINE: 6481
Crash in surface energy budget
-------------------------------------------
Abort(1) on node 8 (rank 8 in comm 0): application called MPI_Abort(MPI_COMM_WORLD, 1) - process 8
Click to expand...

When Setting debug_level=100,here is output of the rsl.error.0008 file
Code: 
d03 2014-04-22_12:14:30 Top of Radiation Driver
d03 2014-04-22_12:14:30 calling inc/HALO_PWP_inline.inc
d03 2014-04-22_12:14:30 in SFCLAY
d03 2014-04-22_12:14:30 in RUC LSM
d03 2014-04-22_12:14:30 in YSU PBL
d03 2014-04-22_12:14:30 calling inc/HALO_EM_FDDA_SFC_inline.inc
d03 2014-04-22_12:14:30 calling inc/HALO_EM_TKE_C_inline.inc
d03 2014-04-22_12:14:30 calling inc/PERIOD_BDY_EM_A1_inline.inc
d03 2014-04-22_12:14:30 calling inc/HALO_EM_HELICITY_inline.inc
d03 2014-04-22_12:14:30 calling inc/HALO_EM_TKE_D_inline.inc
d03 2014-04-22_12:14:30 calling inc/HALO_EM_TKE_E_inline.inc
d03 2014-04-22_12:14:30 calling inc/PERIOD_BDY_EM_PHY_BC_inline.inc
d03 2014-04-22_12:14:30 calling inc/PERIOD_BDY_EM_CHEM_inline.inc
d03 2014-04-22_12:14:30 calling inc/HALO_EM_PHYS_PBL_inline.inc
d03 2014-04-22_12:14:30 calling inc/HALO_EM_PHYS_DIFFUSION_inline.inc
d03 2014-04-22_12:14:30 calling inc/HALO_EM_TKE_5_inline.inc
d03 2014-04-22_12:14:30 calling inc/HALO_EM_B_inline.inc
d03 2014-04-22_12:14:30 calling inc/PERIOD_BDY_EM_B_inline.inc
d03 2014-04-22_12:14:30 calling inc/PERIOD_BDY_EM_B_inline.inc
d03 2014-04-22_12:14:30 calling inc/HALO_EM_C_inline.inc
d03 2014-04-22_12:14:30 calling inc/HALO_EM_C2_inline.inc
d03 2014-04-22_12:14:30 calling inc/PERIOD_BDY_EM_B3_inline.inc
d03 2014-04-22_12:14:30 calling inc/HALO_EM_D_inline.inc
d03 2014-04-22_12:14:30 calling inc/PERIOD_EM_DA_inline.inc
d03 2014-04-22_12:14:30 calling inc/HALO_EM_D2_5_inline.inc
d03 2014-04-22_12:14:30 calling inc/PERIOD_BDY_EM_D_inline.inc
d03 2014-04-22_12:14:30 calling inc/PERIOD_BDY_EM_MOIST2_inline.inc
d03 2014-04-22_12:14:30 calling inc/PERIOD_BDY_EM_CHEM2_inline.inc
d03 2014-04-22_12:14:30 calling inc/PERIOD_BDY_EM_TRACER2_inline.inc
d03 2014-04-22_12:14:30 calling inc/PERIOD_BDY_EM_SCALAR2_inline.inc
d03 2014-04-22_12:14:30 calling inc/PERIOD_BDY_EM_TKE_inline.inc
d03 2014-04-22_12:14:30 calling inc/HALO_EM_TKE_5_inline.inc
d03 2014-04-22_12:14:30 calling inc/HALO_EM_MOIST_E_5_inline.inc
d03 2014-04-22_12:14:30 calling inc/HALO_EM_CHEM_E_5_inline.inc
d03 2014-04-22_12:14:30 calling inc/HALO_EM_SCALAR_E_5_inline.inc
d03 2014-04-22_12:14:30 calling inc/HALO_EM_A_inline.inc
d03 2014-04-22_12:14:30 calling inc/PERIOD_BDY_EM_A_inline.inc
d03 2014-04-22_12:14:30 calling inc/HALO_EM_B_inline.inc
d03 2014-04-22_12:14:30 calling inc/PERIOD_BDY_EM_B_inline.inc
d03 2014-04-22_12:14:30 calling inc/PERIOD_BDY_EM_B_inline.inc
d03 2014-04-22_12:14:30 calling inc/HALO_EM_C_inline.inc
d03 2014-04-22_12:14:30 calling inc/HALO_EM_C2_inline.inc
d03 2014-04-22_12:14:30 calling inc/PERIOD_BDY_EM_B3_inline.inc
d03 2014-04-22_12:14:30 calling inc/PERIOD_BDY_EM_B_inline.inc
d03 2014-04-22_12:14:30 calling inc/HALO_EM_C_inline.inc
d03 2014-04-22_12:14:30 calling inc/HALO_EM_C2_inline.inc
d03 2014-04-22_12:14:30 calling inc/PERIOD_BDY_EM_B3_inline.inc
d03 2014-04-22_12:14:30 calling inc/HALO_EM_D_inline.inc
d03 2014-04-22_12:14:30 calling inc/PERIOD_EM_DA_inline.inc
d03 2014-04-22_12:14:30 calling inc/HALO_EM_D2_5_inline.inc
d03 2014-04-22_12:14:30 calling inc/PERIOD_BDY_EM_D_inline.inc
d03 2014-04-22_12:14:30 calling inc/PERIOD_BDY_EM_MOIST2_inline.inc
d03 2014-04-22_12:14:30 calling inc/PERIOD_BDY_EM_CHEM2_inline.inc
d03 2014-04-22_12:14:30 calling inc/PERIOD_BDY_EM_TRACER2_inline.inc
d03 2014-04-22_12:14:30 calling inc/PERIOD_BDY_EM_SCALAR2_inline.inc
d03 2014-04-22_12:14:30 calling inc/PERIOD_BDY_EM_TKE_inline.inc
d03 2014-04-22_12:14:30 calling inc/HALO_EM_TKE_7_inline.inc
d03 2014-04-22_12:14:30 calling inc/HALO_EM_MOIST_E_7_inline.inc
d03 2014-04-22_12:14:30 calling inc/HALO_EM_CHEM_E_7_inline.inc
d03 2014-04-22_12:14:30 calling inc/HALO_EM_SCALAR_E_7_inline.inc
d03 2014-04-22_12:14:30 calling inc/HALO_EM_A_inline.inc
d03 2014-04-22_12:14:30 calling inc/PERIOD_BDY_EM_A_inline.inc
d03 2014-04-22_12:14:30 calling inc/HALO_EM_B_inline.inc
d03 2014-04-22_12:14:30 calling inc/PERIOD_BDY_EM_B_inline.inc
d03 2014-04-22_12:14:30 calling inc/PERIOD_BDY_EM_B_inline.inc
d03 2014-04-22_12:14:30 calling inc/HALO_EM_C_inline.inc
d03 2014-04-22_12:14:30 calling inc/HALO_EM_C2_inline.inc
d03 2014-04-22_12:14:30 calling inc/PERIOD_BDY_EM_B3_inline.inc
d03 2014-04-22_12:14:30 calling inc/PERIOD_BDY_EM_B_inline.inc
d03 2014-04-22_12:14:30 calling inc/HALO_EM_C_inline.inc
d03 2014-04-22_12:14:30 calling inc/HALO_EM_C2_inline.inc
d03 2014-04-22_12:14:30 calling inc/PERIOD_BDY_EM_B3_inline.inc
d03 2014-04-22_12:14:30 calling inc/PERIOD_BDY_EM_B_inline.inc
d03 2014-04-22_12:14:30 calling inc/HALO_EM_C_inline.inc
d03 2014-04-22_12:14:30 calling inc/HALO_EM_C2_inline.inc
d03 2014-04-22_12:14:30 calling inc/PERIOD_BDY_EM_B3_inline.inc
d03 2014-04-22_12:14:30 calling inc/PERIOD_BDY_EM_B_inline.inc
d03 2014-04-22_12:14:30 calling inc/HALO_EM_C_inline.inc
d03 2014-04-22_12:14:30 calling inc/HALO_EM_C2_inline.inc
d03 2014-04-22_12:14:30 calling inc/PERIOD_BDY_EM_B3_inline.inc
d03 2014-04-22_12:14:30 calling inc/HALO_EM_MOIST_OLD_E_7_inline.inc
d03 2014-04-22_12:14:30 calling inc/PERIOD_BDY_EM_MOIST_OLD_inline.inc
d03 2014-04-22_12:14:30 calling inc/HALO_EM_SCALAR_OLD_E_7_inline.inc
d03 2014-04-22_12:14:30 calling inc/PERIOD_BDY_EM_SCALAR_OLD_inline.inc
d03 2014-04-22_12:14:30 calling inc/HALO_EM_CHEM_OLD_E_7_inline.inc
d03 2014-04-22_12:14:30 calling inc/PERIOD_BDY_EM_CHEM_OLD_inline.inc
d03 2014-04-22_12:14:30 calling inc/HALO_EM_TRACER_OLD_E_7_inline.inc
d03 2014-04-22_12:14:30 calling inc/PERIOD_BDY_EM_TRACER_OLD_inline.inc
d03 2014-04-22_12:14:30 calling inc/HALO_EM_D_inline.inc
d03 2014-04-22_12:14:30 calling inc/PERIOD_EM_DA_inline.inc
d03 2014-04-22_12:14:30 calling inc/HALO_EM_SBM_inline.inc
d03 2014-04-22_12:14:30 microphysics_driver: calling morrison two moment
d03 2014-04-22_12:14:30 zero out small condensates, zero out negative vapor
d03 2014-04-22_12:14:30 zero out small condensates, zero out negative vapor
d03 2014-04-22_12:14:30 zero out small condensates, zero out negative vapor
d03 2014-04-22_12:14:30 zero out small condensates, zero out negative vapor
d03 2014-04-22_12:14:30 calling inc/HALO_EM_THETAM_inline.inc
d03 2014-04-22_12:14:30 calling inc/PERIOD_EM_THETAM_inline.inc
d03 2014-04-22_12:14:30 calling inc/HALO_EM_D3_5_inline.inc
d03 2014-04-22_12:14:30 calling inc/PERIOD_BDY_EM_D3_inline.inc
d03 2014-04-22_12:14:30 calling inc/PERIOD_BDY_EM_MOIST_inline.inc
d03 2014-04-22_12:14:30 calling inc/PERIOD_BDY_EM_CHEM_inline.inc
d03 2014-04-22_12:14:30 calling inc/PERIOD_BDY_EM_TRACER_inline.inc
d03 2014-04-22_12:14:30 calling inc/PERIOD_BDY_EM_SCALAR_inline.inc
d03 2014-04-22_12:14:30 calling inc/HALO_EM_C_inline.inc
d03 2014-04-22_12:14:30 calling inc/PERIOD_BDY_EM_E_inline.inc
d03 2014-04-22_12:14:30  call set_w_surface
d03 2014-04-22_12:14:30 calling inc/HALO_EM_PHYS_W_inline.inc
d03 2014-04-22_12:14:30 calling inc/HALO_EM_PHYS_HCW_inline.inc
d03 2014-04-22_12:14:30 --> TOP OF AFTER ALL RK STEPS
d03 2014-04-22_12:14:30 --> CALLING DIAGNOSTICS DRIVER
d03 2014-04-22_12:14:30 --> TOP OF DIAGNOSTICS PACKAGE
d03 2014-04-22_12:14:30 --> CALL DIAGNOSTICS PACKAGE: ACCUMULATED AND BUCKET DIAGNOSTICS
d03 2014-04-22_12:14:30 calling inc/HALO_EM_E_5_inline.inc
d03 2014-04-22_12:14:30 calling inc/HALO_EM_MOIST_E_5_inline.inc
d03 2014-04-22_12:14:30 calling inc/HALO_EM_CHEM_E_5_inline.inc
d03 2014-04-22_12:14:30 calling inc/HALO_EM_SCALAR_E_5_inline.inc
d03 2014-04-22_12:14:30 calling cbmz_mosaic_8bin aerosols driver from chem_driver
d03 2014-04-22_12:14:30 calling chem_opt=? from chem_driver
d03 2014-04-22_12:14:30  call chem_prep
d03 2014-04-22_12:14:30 calling emissions driver
d03 2014-04-22_12:14:30 No tracer option selected
d03 2014-04-22_12:14:30 Gocart sea salt emissions
d03 2014-04-22_12:14:30 AFWA modified Gocart dust emissions
d03 2014-04-22_12:14:30 Gocart dms emissions
d03 2014-04-22_12:14:30 fire emissions: adding biomassb emissions
d03 2014-04-22_12:14:30 nothing done with burn emissions for tracers here
d03 2014-04-22_12:14:30 nothing done with burn emissions for chem array
d03 2014-04-22_12:14:30 emissions_driver calling cbmz_addemiss_anthro
d03 2014-04-22_12:14:30 emissions_driver calling cbmz_addemiss_bio
d03 2014-04-22_12:14:30 emissions_driver not calling add_emiss_cptec
d03 2014-04-22_12:14:30 emissions_driver calling mosaic_addemiss
d03 2014-04-22_12:14:30 mosaic_addemiss: emiss_opt = eptec
d03 2014-04-22_12:14:30 mosaic_addemiss: gocart speciation being mapped to mosaic
d03 2014-04-22_12:14:30 mosaic_addemiss: adding fire emissions to MOSAIC
d03 2014-04-22_12:14:30 calling dry_deposition_driver
d03 2014-04-22_12:14:30 DOING DRY DEP VELOCITIES WITH WESELY METHOD
d03 2014-04-22_12:14:30 in dry_dep_wesely
d03 2014-04-22_12:14:30 DOING DRY DEP VELOCITIES FOR MOSAIC AEROSOLS
d03 2014-04-22_12:14:30 no settling routine
d03 2014-04-22_12:14:30 end of dry_dep_driver
d03 2014-04-22_12:14:30 calling calc_het_n2o5
d03 2014-04-22_12:14:30 sum_pm_driver: calling sum_pm_mosaic
d03 2014-04-22_12:14:30 done tileloop in chem_driver
d03 2014-04-22_12:14:30 calculate optical output stuff
d03 2014-04-22_12:14:40 module_integrate: back from solve interface
d03 2014-04-22_12:14:40 module_integrate: calling solve interface
d03 2014-04-22_12:14:40 calling inc/HALO_EM_CHEM_E_5_inline.inc
d03 2014-04-22_12:14:40 calling inc/HALO_EM_MOIST_OLD_E_7_inline.inc
d03 2014-04-22_12:14:40 calling inc/PERIOD_BDY_EM_MOIST_OLD_inline.inc
d03 2014-04-22_12:14:40 calling inc/HALO_EM_A_inline.inc
d03 2014-04-22_12:14:40 calling inc/PERIOD_BDY_EM_A_inline.inc
d03 2014-04-22_12:14:40 calling inc/HALO_EM_PHYS_A_inline.inc
d03 2014-04-22_12:14:40 Top of Radiation Driver
d03 2014-04-22_12:14:40 calling inc/HALO_PWP_inline.inc
d03 2014-04-22_12:14:40 in SFCLAY
d03 2014-04-22_12:14:40 in RUC LSM
d03 2014-04-22_12:14:40 in YSU PBL
d03 2014-04-22_12:14:40 calling inc/HALO_EM_FDDA_SFC_inline.inc
d03 2014-04-22_12:14:40 calling inc/HALO_EM_TKE_C_inline.inc
d03 2014-04-22_12:14:40 calling inc/PERIOD_BDY_EM_A1_inline.inc
d03 2014-04-22_12:14:40 calling inc/HALO_EM_HELICITY_inline.inc
d03 2014-04-22_12:14:40 calling inc/HALO_EM_TKE_D_inline.inc
d03 2014-04-22_12:14:40 calling inc/HALO_EM_TKE_E_inline.inc
d03 2014-04-22_12:14:40 calling inc/PERIOD_BDY_EM_PHY_BC_inline.inc
d03 2014-04-22_12:14:40 calling inc/PERIOD_BDY_EM_CHEM_inline.inc
d03 2014-04-22_12:14:40 calling inc/HALO_EM_PHYS_PBL_inline.inc
d03 2014-04-22_12:14:40 calling inc/HALO_EM_PHYS_DIFFUSION_inline.inc
d03 2014-04-22_12:14:40 calling inc/HALO_EM_TKE_5_inline.inc
d03 2014-04-22_12:14:40 calling inc/HALO_EM_B_inline.inc
d03 2014-04-22_12:14:40 calling inc/PERIOD_BDY_EM_B_inline.inc
d03 2014-04-22_12:14:40 calling inc/PERIOD_BDY_EM_B_inline.inc
d03 2014-04-22_12:14:40 calling inc/HALO_EM_C_inline.inc
d03 2014-04-22_12:14:40 calling inc/HALO_EM_C2_inline.inc
d03 2014-04-22_12:14:40 calling inc/PERIOD_BDY_EM_B3_inline.inc
d03 2014-04-22_12:14:40 calling inc/HALO_EM_D_inline.inc
d03 2014-04-22_12:14:40 calling inc/PERIOD_EM_DA_inline.inc
d03 2014-04-22_12:14:40 calling inc/HALO_EM_D2_5_inline.inc
d03 2014-04-22_12:14:40 calling inc/PERIOD_BDY_EM_D_inline.inc
d03 2014-04-22_12:14:40 calling inc/PERIOD_BDY_EM_MOIST2_inline.inc
d03 2014-04-22_12:14:40 calling inc/PERIOD_BDY_EM_CHEM2_inline.inc
d03 2014-04-22_12:14:40 calling inc/PERIOD_BDY_EM_TRACER2_inline.inc
d03 2014-04-22_12:14:40 calling inc/PERIOD_BDY_EM_SCALAR2_inline.inc
d03 2014-04-22_12:14:40 calling inc/PERIOD_BDY_EM_TKE_inline.inc
d03 2014-04-22_12:14:40 calling inc/HALO_EM_TKE_5_inline.inc
d03 2014-04-22_12:14:40 calling inc/HALO_EM_MOIST_E_5_inline.inc
d03 2014-04-22_12:14:40 calling inc/HALO_EM_CHEM_E_5_inline.inc
d03 2014-04-22_12:14:40 calling inc/HALO_EM_SCALAR_E_5_inline.inc
d03 2014-04-22_12:14:40 calling inc/HALO_EM_A_inline.inc
d03 2014-04-22_12:14:40 calling inc/PERIOD_BDY_EM_A_inline.inc
d03 2014-04-22_12:14:40 calling inc/HALO_EM_B_inline.inc
d03 2014-04-22_12:14:40 calling inc/PERIOD_BDY_EM_B_inline.inc
d03 2014-04-22_12:14:40 calling inc/PERIOD_BDY_EM_B_inline.inc
d03 2014-04-22_12:14:40 calling inc/HALO_EM_C_inline.inc
d03 2014-04-22_12:14:40 calling inc/HALO_EM_C2_inline.inc
d03 2014-04-22_12:14:40 calling inc/PERIOD_BDY_EM_B3_inline.inc
d03 2014-04-22_12:14:40 calling inc/PERIOD_BDY_EM_B_inline.inc
d03 2014-04-22_12:14:40 calling inc/HALO_EM_C_inline.inc
d03 2014-04-22_12:14:40 calling inc/HALO_EM_C2_inline.inc
d03 2014-04-22_12:14:40 calling inc/PERIOD_BDY_EM_B3_inline.inc
d03 2014-04-22_12:14:40 calling inc/HALO_EM_D_inline.inc
d03 2014-04-22_12:14:40 calling inc/PERIOD_EM_DA_inline.inc
d03 2014-04-22_12:14:40 calling inc/HALO_EM_D2_5_inline.inc
d03 2014-04-22_12:14:40 calling inc/PERIOD_BDY_EM_D_inline.inc
d03 2014-04-22_12:14:40 calling inc/PERIOD_BDY_EM_MOIST2_inline.inc
d03 2014-04-22_12:14:40 calling inc/PERIOD_BDY_EM_CHEM2_inline.inc
d03 2014-04-22_12:14:40 calling inc/PERIOD_BDY_EM_TRACER2_inline.inc
d03 2014-04-22_12:14:40 calling inc/PERIOD_BDY_EM_SCALAR2_inline.inc
d03 2014-04-22_12:14:40 calling inc/PERIOD_BDY_EM_TKE_inline.inc
d03 2014-04-22_12:14:40 calling inc/HALO_EM_TKE_7_inline.inc
d03 2014-04-22_12:14:40 calling inc/HALO_EM_MOIST_E_7_inline.inc
d03 2014-04-22_12:14:40 calling inc/HALO_EM_CHEM_E_7_inline.inc
d03 2014-04-22_12:14:40 calling inc/HALO_EM_SCALAR_E_7_inline.inc
d03 2014-04-22_12:14:40 calling inc/HALO_EM_A_inline.inc
d03 2014-04-22_12:14:40 calling inc/PERIOD_BDY_EM_A_inline.inc
d03 2014-04-22_12:14:40 calling inc/HALO_EM_B_inline.inc
d03 2014-04-22_12:14:40 calling inc/PERIOD_BDY_EM_B_inline.inc
d03 2014-04-22_12:14:40 calling inc/PERIOD_BDY_EM_B_inline.inc
d03 2014-04-22_12:14:40 calling inc/HALO_EM_C_inline.inc
d03 2014-04-22_12:14:40 calling inc/HALO_EM_C2_inline.inc
d03 2014-04-22_12:14:40 calling inc/PERIOD_BDY_EM_B3_inline.inc
d03 2014-04-22_12:14:40 calling inc/PERIOD_BDY_EM_B_inline.inc
d03 2014-04-22_12:14:40 calling inc/HALO_EM_C_inline.inc
d03 2014-04-22_12:14:40 calling inc/HALO_EM_C2_inline.inc
d03 2014-04-22_12:14:40 calling inc/PERIOD_BDY_EM_B3_inline.inc
d03 2014-04-22_12:14:40 calling inc/PERIOD_BDY_EM_B_inline.inc
d03 2014-04-22_12:14:40 calling inc/HALO_EM_C_inline.inc
d03 2014-04-22_12:14:40 calling inc/HALO_EM_C2_inline.inc
d03 2014-04-22_12:14:40 calling inc/PERIOD_BDY_EM_B3_inline.inc
d03 2014-04-22_12:14:40 calling inc/PERIOD_BDY_EM_B_inline.inc
d03 2014-04-22_12:14:40 calling inc/HALO_EM_C_inline.inc
d03 2014-04-22_12:14:40 calling inc/HALO_EM_C2_inline.inc
d03 2014-04-22_12:14:40 calling inc/PERIOD_BDY_EM_B3_inline.inc
d03 2014-04-22_12:14:40 calling inc/HALO_EM_MOIST_OLD_E_7_inline.inc
d03 2014-04-22_12:14:40 calling inc/PERIOD_BDY_EM_MOIST_OLD_inline.inc
d03 2014-04-22_12:14:40 calling inc/HALO_EM_SCALAR_OLD_E_7_inline.inc
d03 2014-04-22_12:14:40 calling inc/PERIOD_BDY_EM_SCALAR_OLD_inline.inc
d03 2014-04-22_12:14:40 calling inc/HALO_EM_CHEM_OLD_E_7_inline.inc
d03 2014-04-22_12:14:40 calling inc/PERIOD_BDY_EM_CHEM_OLD_inline.inc
d03 2014-04-22_12:14:40 calling inc/HALO_EM_TRACER_OLD_E_7_inline.inc
d03 2014-04-22_12:14:40 calling inc/PERIOD_BDY_EM_TRACER_OLD_inline.inc
d03 2014-04-22_12:14:40 calling inc/HALO_EM_D_inline.inc
d03 2014-04-22_12:14:40 calling inc/PERIOD_EM_DA_inline.inc
d03 2014-04-22_12:14:40 calling inc/HALO_EM_SBM_inline.inc
d03 2014-04-22_12:14:40 microphysics_driver: calling morrison two moment
d03 2014-04-22_12:14:40 zero out small condensates, zero out negative vapor
d03 2014-04-22_12:14:40 zero out small condensates, zero out negative vapor
d03 2014-04-22_12:14:40 zero out small condensates, zero out negative vapor
d03 2014-04-22_12:14:40 zero out small condensates, zero out negative vapor
d03 2014-04-22_12:14:40 calling inc/HALO_EM_THETAM_inline.inc
d03 2014-04-22_12:14:40 calling inc/PERIOD_EM_THETAM_inline.inc
d03 2014-04-22_12:14:40 calling inc/HALO_EM_D3_5_inline.inc
d03 2014-04-22_12:14:40 calling inc/PERIOD_BDY_EM_D3_inline.inc
d03 2014-04-22_12:14:40 calling inc/PERIOD_BDY_EM_MOIST_inline.inc
d03 2014-04-22_12:14:40 calling inc/PERIOD_BDY_EM_CHEM_inline.inc
d03 2014-04-22_12:14:40 calling inc/PERIOD_BDY_EM_TRACER_inline.inc
d03 2014-04-22_12:14:40 calling inc/PERIOD_BDY_EM_SCALAR_inline.inc
d03 2014-04-22_12:14:40 calling inc/HALO_EM_C_inline.inc
d03 2014-04-22_12:14:40 calling inc/PERIOD_BDY_EM_E_inline.inc
d03 2014-04-22_12:14:40  call set_w_surface
d03 2014-04-22_12:14:40 calling inc/HALO_EM_PHYS_W_inline.inc
d03 2014-04-22_12:14:40 calling inc/HALO_EM_PHYS_HCW_inline.inc
d03 2014-04-22_12:14:40 --> TOP OF AFTER ALL RK STEPS
d03 2014-04-22_12:14:40 --> CALLING DIAGNOSTICS DRIVER
d03 2014-04-22_12:14:40 --> TOP OF DIAGNOSTICS PACKAGE
d03 2014-04-22_12:14:40 --> CALL DIAGNOSTICS PACKAGE: ACCUMULATED AND BUCKET DIAGNOSTICS
d03 2014-04-22_12:14:40 calling inc/HALO_EM_E_5_inline.inc
d03 2014-04-22_12:14:40 calling inc/HALO_EM_MOIST_E_5_inline.inc
d03 2014-04-22_12:14:40 calling inc/HALO_EM_CHEM_E_5_inline.inc
d03 2014-04-22_12:14:40 calling inc/HALO_EM_SCALAR_E_5_inline.inc
d03 2014-04-22_12:14:40 calling cbmz_mosaic_8bin aerosols driver from chem_driver
d03 2014-04-22_12:14:40 calling chem_opt=? from chem_driver
d03 2014-04-22_12:14:40  call chem_prep
d03 2014-04-22_12:14:40 calling emissions driver
d03 2014-04-22_12:14:40 No tracer option selected
d03 2014-04-22_12:14:40 Gocart sea salt emissions
d03 2014-04-22_12:14:40 AFWA modified Gocart dust emissions
d03 2014-04-22_12:14:40 Gocart dms emissions
d03 2014-04-22_12:14:40 fire emissions: adding biomassb emissions
d03 2014-04-22_12:14:40 nothing done with burn emissions for tracers here
d03 2014-04-22_12:14:40 nothing done with burn emissions for chem array
d03 2014-04-22_12:14:40 emissions_driver calling cbmz_addemiss_anthro
d03 2014-04-22_12:14:40 emissions_driver calling cbmz_addemiss_bio
d03 2014-04-22_12:14:40 emissions_driver not calling add_emiss_cptec
d03 2014-04-22_12:14:40 emissions_driver calling mosaic_addemiss
d03 2014-04-22_12:14:40 mosaic_addemiss: emiss_opt = eptec
d03 2014-04-22_12:14:40 mosaic_addemiss: gocart speciation being mapped to mosaic
d03 2014-04-22_12:14:40 mosaic_addemiss: adding fire emissions to MOSAIC
d03 2014-04-22_12:14:40 calling dry_deposition_driver
d03 2014-04-22_12:14:40 DOING DRY DEP VELOCITIES WITH WESELY METHOD
d03 2014-04-22_12:14:40 in dry_dep_wesely
d03 2014-04-22_12:14:40 DOING DRY DEP VELOCITIES FOR MOSAIC AEROSOLS
d03 2014-04-22_12:14:40 no settling routine
d03 2014-04-22_12:14:40 end of dry_dep_driver
d03 2014-04-22_12:14:40 calling calc_het_n2o5
d03 2014-04-22_12:14:40 sum_pm_driver: calling sum_pm_mosaic
d03 2014-04-22_12:14:40 done tileloop in chem_driver
d03 2014-04-22_12:14:40 calculate optical output stuff
d03 2014-04-22_12:14:50 module_integrate: back from solve interface
d03 2014-04-22_12:14:50 module_integrate: calling solve interface
d03 2014-04-22_12:14:50 calling inc/HALO_EM_CHEM_E_5_inline.inc
d03 2014-04-22_12:14:50 calling inc/HALO_EM_MOIST_OLD_E_7_inline.inc
d03 2014-04-22_12:14:50 calling inc/PERIOD_BDY_EM_MOIST_OLD_inline.inc
d03 2014-04-22_12:14:50 calling inc/HALO_EM_A_inline.inc
d03 2014-04-22_12:14:50 calling inc/PERIOD_BDY_EM_A_inline.inc
d03 2014-04-22_12:14:50 calling inc/HALO_EM_PHYS_A_inline.inc
d03 2014-04-22_12:14:50 Top of Radiation Driver
d03 2014-04-22_12:14:50 calling inc/HALO_PWP_inline.inc
d03 2014-04-22_12:14:50 in SFCLAY
d03 2014-04-22_12:14:50 in RUC LSM
d03 2014-04-22_12:14:50 in YSU PBL
d03 2014-04-22_12:14:50 calling inc/HALO_EM_FDDA_SFC_inline.inc
d03 2014-04-22_12:14:50 calling inc/HALO_EM_TKE_C_inline.inc
d03 2014-04-22_12:14:50 calling inc/PERIOD_BDY_EM_A1_inline.inc
d03 2014-04-22_12:14:50 calling inc/HALO_EM_HELICITY_inline.inc
d03 2014-04-22_12:14:50 calling inc/HALO_EM_TKE_D_inline.inc
d03 2014-04-22_12:14:50 calling inc/HALO_EM_TKE_E_inline.inc
d03 2014-04-22_12:14:50 calling inc/PERIOD_BDY_EM_PHY_BC_inline.inc
d03 2014-04-22_12:14:50 calling inc/PERIOD_BDY_EM_CHEM_inline.inc
d03 2014-04-22_12:14:50 calling inc/HALO_EM_PHYS_PBL_inline.inc
d03 2014-04-22_12:14:50 calling inc/HALO_EM_PHYS_DIFFUSION_inline.inc
d03 2014-04-22_12:14:50 calling inc/HALO_EM_TKE_5_inline.inc
d03 2014-04-22_12:14:50 calling inc/HALO_EM_B_inline.inc
d03 2014-04-22_12:14:50 calling inc/PERIOD_BDY_EM_B_inline.inc
d03 2014-04-22_12:14:50 calling inc/PERIOD_BDY_EM_B_inline.inc
d03 2014-04-22_12:14:50 calling inc/HALO_EM_C_inline.inc
d03 2014-04-22_12:14:50 calling inc/HALO_EM_C2_inline.inc
d03 2014-04-22_12:14:50 calling inc/PERIOD_BDY_EM_B3_inline.inc
d03 2014-04-22_12:14:50 calling inc/HALO_EM_D_inline.inc
d03 2014-04-22_12:14:50 calling inc/PERIOD_EM_DA_inline.inc
d03 2014-04-22_12:14:50 calling inc/HALO_EM_D2_5_inline.inc
d03 2014-04-22_12:14:50 calling inc/PERIOD_BDY_EM_D_inline.inc
d03 2014-04-22_12:14:50 calling inc/PERIOD_BDY_EM_MOIST2_inline.inc
d03 2014-04-22_12:14:50 calling inc/PERIOD_BDY_EM_CHEM2_inline.inc
d03 2014-04-22_12:14:50 calling inc/PERIOD_BDY_EM_TRACER2_inline.inc
d03 2014-04-22_12:14:50 calling inc/PERIOD_BDY_EM_SCALAR2_inline.inc
d03 2014-04-22_12:14:50 calling inc/PERIOD_BDY_EM_TKE_inline.inc
d03 2014-04-22_12:14:50 calling inc/HALO_EM_TKE_5_inline.inc
d03 2014-04-22_12:14:50 calling inc/HALO_EM_MOIST_E_5_inline.inc
d03 2014-04-22_12:14:50 calling inc/HALO_EM_CHEM_E_5_inline.inc
d03 2014-04-22_12:14:50 calling inc/HALO_EM_SCALAR_E_5_inline.inc
d03 2014-04-22_12:14:50 calling inc/HALO_EM_A_inline.inc
d03 2014-04-22_12:14:50 calling inc/PERIOD_BDY_EM_A_inline.inc
d03 2014-04-22_12:14:50 calling inc/HALO_EM_B_inline.inc
d03 2014-04-22_12:14:50 calling inc/PERIOD_BDY_EM_B_inline.inc
d03 2014-04-22_12:14:50 calling inc/PERIOD_BDY_EM_B_inline.inc
d03 2014-04-22_12:14:50 calling inc/HALO_EM_C_inline.inc
d03 2014-04-22_12:14:50 calling inc/HALO_EM_C2_inline.inc
d03 2014-04-22_12:14:50 calling inc/PERIOD_BDY_EM_B3_inline.inc
d03 2014-04-22_12:14:50 calling inc/PERIOD_BDY_EM_B_inline.inc
d03 2014-04-22_12:14:50 calling inc/HALO_EM_C_inline.inc
d03 2014-04-22_12:14:50 calling inc/HALO_EM_C2_inline.inc
d03 2014-04-22_12:14:50 calling inc/PERIOD_BDY_EM_B3_inline.inc
d03 2014-04-22_12:14:50 calling inc/HALO_EM_D_inline.inc
d03 2014-04-22_12:14:50 calling inc/PERIOD_EM_DA_inline.inc
d03 2014-04-22_12:14:50 calling inc/HALO_EM_D2_5_inline.inc
d03 2014-04-22_12:14:50 calling inc/PERIOD_BDY_EM_D_inline.inc
d03 2014-04-22_12:14:50 calling inc/PERIOD_BDY_EM_MOIST2_inline.inc
d03 2014-04-22_12:14:50 calling inc/PERIOD_BDY_EM_CHEM2_inline.inc
d03 2014-04-22_12:14:50 calling inc/PERIOD_BDY_EM_TRACER2_inline.inc
d03 2014-04-22_12:14:50 calling inc/PERIOD_BDY_EM_SCALAR2_inline.inc
d03 2014-04-22_12:14:50 calling inc/PERIOD_BDY_EM_TKE_inline.inc
d03 2014-04-22_12:14:50 calling inc/HALO_EM_TKE_7_inline.inc
d03 2014-04-22_12:14:50 calling inc/HALO_EM_MOIST_E_7_inline.inc
d03 2014-04-22_12:14:50 calling inc/HALO_EM_CHEM_E_7_inline.inc
d03 2014-04-22_12:14:50 calling inc/HALO_EM_SCALAR_E_7_inline.inc
d03 2014-04-22_12:14:50 calling inc/HALO_EM_A_inline.inc
d03 2014-04-22_12:14:50 calling inc/PERIOD_BDY_EM_A_inline.inc
d03 2014-04-22_12:14:50 calling inc/HALO_EM_B_inline.inc
d03 2014-04-22_12:14:50 calling inc/PERIOD_BDY_EM_B_inline.inc
d03 2014-04-22_12:14:50 calling inc/PERIOD_BDY_EM_B_inline.inc
d03 2014-04-22_12:14:50 calling inc/HALO_EM_C_inline.inc
d03 2014-04-22_12:14:50 calling inc/HALO_EM_C2_inline.inc
d03 2014-04-22_12:14:50 calling inc/PERIOD_BDY_EM_B3_inline.inc
d03 2014-04-22_12:14:50 calling inc/PERIOD_BDY_EM_B_inline.inc
d03 2014-04-22_12:14:50 calling inc/HALO_EM_C_inline.inc
d03 2014-04-22_12:14:50 calling inc/HALO_EM_C2_inline.inc
d03 2014-04-22_12:14:50 calling inc/PERIOD_BDY_EM_B3_inline.inc
d03 2014-04-22_12:14:50 calling inc/PERIOD_BDY_EM_B_inline.inc
d03 2014-04-22_12:14:50 calling inc/HALO_EM_C_inline.inc
d03 2014-04-22_12:14:50 calling inc/HALO_EM_C2_inline.inc
d03 2014-04-22_12:14:50 calling inc/PERIOD_BDY_EM_B3_inline.inc
d03 2014-04-22_12:14:50 calling inc/PERIOD_BDY_EM_B_inline.inc
d03 2014-04-22_12:14:50 calling inc/HALO_EM_C_inline.inc
d03 2014-04-22_12:14:50 calling inc/HALO_EM_C2_inline.inc
d03 2014-04-22_12:14:50 calling inc/PERIOD_BDY_EM_B3_inline.inc
d03 2014-04-22_12:14:50 calling inc/HALO_EM_MOIST_OLD_E_7_inline.inc
d03 2014-04-22_12:14:50 calling inc/PERIOD_BDY_EM_MOIST_OLD_inline.inc
d03 2014-04-22_12:14:50 calling inc/HALO_EM_SCALAR_OLD_E_7_inline.inc
d03 2014-04-22_12:14:50 calling inc/PERIOD_BDY_EM_SCALAR_OLD_inline.inc
d03 2014-04-22_12:14:50 calling inc/HALO_EM_CHEM_OLD_E_7_inline.inc
d03 2014-04-22_12:14:50 calling inc/PERIOD_BDY_EM_CHEM_OLD_inline.inc
d03 2014-04-22_12:14:50 calling inc/HALO_EM_TRACER_OLD_E_7_inline.inc
d03 2014-04-22_12:14:50 calling inc/PERIOD_BDY_EM_TRACER_OLD_inline.inc
d03 2014-04-22_12:14:50 calling inc/HALO_EM_D_inline.inc
d03 2014-04-22_12:14:50 calling inc/PERIOD_EM_DA_inline.inc
d03 2014-04-22_12:14:50 calling inc/HALO_EM_SBM_inline.inc
d03 2014-04-22_12:14:50 microphysics_driver: calling morrison two moment
d03 2014-04-22_12:14:50 zero out small condensates, zero out negative vapor
d03 2014-04-22_12:14:50 zero out small condensates, zero out negative vapor
d03 2014-04-22_12:14:50 zero out small condensates, zero out negative vapor
d03 2014-04-22_12:14:50 zero out small condensates, zero out negative vapor
d03 2014-04-22_12:14:50 calling inc/HALO_EM_THETAM_inline.inc
d03 2014-04-22_12:14:50 calling inc/PERIOD_EM_THETAM_inline.inc
d03 2014-04-22_12:14:50 calling inc/HALO_EM_D3_5_inline.inc
d03 2014-04-22_12:14:50 calling inc/PERIOD_BDY_EM_D3_inline.inc
d03 2014-04-22_12:14:50 calling inc/PERIOD_BDY_EM_MOIST_inline.inc
d03 2014-04-22_12:14:50 calling inc/PERIOD_BDY_EM_CHEM_inline.inc
d03 2014-04-22_12:14:50 calling inc/PERIOD_BDY_EM_TRACER_inline.inc
d03 2014-04-22_12:14:50 calling inc/PERIOD_BDY_EM_SCALAR_inline.inc
d03 2014-04-22_12:14:50 calling inc/HALO_EM_C_inline.inc
d03 2014-04-22_12:14:50 calling inc/PERIOD_BDY_EM_E_inline.inc
d03 2014-04-22_12:14:50  call set_w_surface
d03 2014-04-22_12:14:50 calling inc/HALO_EM_PHYS_W_inline.inc
d03 2014-04-22_12:14:50 calling inc/HALO_EM_PHYS_HCW_inline.inc
d03 2014-04-22_12:14:50 --> TOP OF AFTER ALL RK STEPS
d03 2014-04-22_12:14:50 --> CALLING DIAGNOSTICS DRIVER
d03 2014-04-22_12:14:50 --> TOP OF DIAGNOSTICS PACKAGE
d03 2014-04-22_12:14:50 --> CALL DIAGNOSTICS PACKAGE: ACCUMULATED AND BUCKET DIAGNOSTICS
d03 2014-04-22_12:14:50 calling inc/HALO_EM_E_5_inline.inc
d03 2014-04-22_12:14:50 calling inc/HALO_EM_MOIST_E_5_inline.inc
d03 2014-04-22_12:14:50 calling inc/HALO_EM_CHEM_E_5_inline.inc
d03 2014-04-22_12:14:50 calling inc/HALO_EM_SCALAR_E_5_inline.inc
d03 2014-04-22_12:14:50 calling cbmz_mosaic_8bin aerosols driver from chem_driver
d03 2014-04-22_12:14:50 calling chem_opt=? from chem_driver
d03 2014-04-22_12:14:50  call chem_prep
d03 2014-04-22_12:14:50 calling emissions driver
d03 2014-04-22_12:14:50 No tracer option selected
d03 2014-04-22_12:14:50 Gocart sea salt emissions
d03 2014-04-22_12:14:50 AFWA modified Gocart dust emissions
d03 2014-04-22_12:14:50 Gocart dms emissions
d03 2014-04-22_12:14:50 fire emissions: adding biomassb emissions
d03 2014-04-22_12:14:50 nothing done with burn emissions for tracers here
d03 2014-04-22_12:14:50 nothing done with burn emissions for chem array
d03 2014-04-22_12:14:50 emissions_driver calling cbmz_addemiss_anthro
d03 2014-04-22_12:14:50 emissions_driver calling cbmz_addemiss_bio
d03 2014-04-22_12:14:50 emissions_driver not calling add_emiss_cptec
d03 2014-04-22_12:14:50 emissions_driver calling mosaic_addemiss
d03 2014-04-22_12:14:50 mosaic_addemiss: emiss_opt = eptec
d03 2014-04-22_12:14:50 mosaic_addemiss: gocart speciation being mapped to mosaic
d03 2014-04-22_12:14:50 mosaic_addemiss: adding fire emissions to MOSAIC
d03 2014-04-22_12:14:50 calling dry_deposition_driver
d03 2014-04-22_12:14:50 DOING DRY DEP VELOCITIES WITH WESELY METHOD
d03 2014-04-22_12:14:50 in dry_dep_wesely
d03 2014-04-22_12:14:50 DOING DRY DEP VELOCITIES FOR MOSAIC AEROSOLS
d03 2014-04-22_12:14:50 no settling routine
d03 2014-04-22_12:14:50 end of dry_dep_driver
d03 2014-04-22_12:14:50 calling calc_het_n2o5
d03 2014-04-22_12:14:50 calling cbmz_driver from mechanism_driver
d03 2014-04-22_12:14:50
d03 2014-04-22_12:14:50 output from dump_cbmz_gasodeinfo
d03 2014-04-22_12:14:50 oderegime(1-6)          0   39273564          0          0          0          0
d03 2014-04-22_12:14:50 odestatus(1-6)   39273564          0          0          0          0   39273564
d03 2014-04-22_12:14:50 inforodas(1-3)          0--039273564          0--180326640          0--090163320
d03 2014-04-22_12:14:50 inforodas(4-6)          0--087606810          0--002556510          0--000000000
d03 2014-04-22_12:14:50 calling kpp_mechanism_driver
d03 2014-04-22_12:14:50 no gocart so2-so4 conversion
d03 2014-04-22_12:14:50 aerosols_driver calling mosaic_aerchem_driver
newnucbb mins   2.33E+02  5.00E-02  8.58E-11  2.97E-15  2.73E-22  0.00E+00
newnucbb maxs   2.92E+02  8.59E-01  7.52E-10  5.27E-12  1.39E-09  8.48E+05
newnucbb avgs   2.58E+02  4.22E-01  1.56E-10  8.19E-13  7.36E-11  2.25E+02
newnucbb hinuc  2.33E+02  3.34E-01  9.07E-11  4.54E-13  3.60E-13  8.48E+05
newnucbb dtnuc  9.00E+01
newnucbb ncnt      22572        11         0         0         0         0         0
coagbb ncntaa      22572         0       628      1280      3163         0         0         0         0         0
d03 2014-04-22_12:14:50 sum_pm_driver: calling sum_pm_mosaic
d03 2014-04-22_12:14:50 done tileloop in chem_driver
d03 2014-04-22_12:14:50 calculate optical output stuff
d03 2014-04-22_12:15:00 module_integrate: back from solve interface
d03 2014-04-22_12:15:00            2  module_integrate: back from recursive call to integrate
d03 2014-04-22_12:15:00 module_integrate: calling med_nest_feedback
d03 2014-04-22_12:15:00 calling inc/HALO_INTERP_UP_inline.inc
d03 2014-04-22_12:15:00 calling inc/HALO_INTERP_UP_inline.inc
d03 2014-04-22_12:15:00 calling inc/HALO_EM_FEEDBACK_inline.inc
d03 2014-04-22_12:15:00 module_integrate: back from med_nest_feedback
d02 2014-04-22_12:15:00            1  module_integrate: back from recursive call to integrate
d02 2014-04-22_12:15:00 module_integrate: calling med_nest_feedback
d02 2014-04-22_12:15:00 calling inc/HALO_INTERP_UP_inline.inc
d02 2014-04-22_12:15:00 calling inc/HALO_INTERP_UP_inline.inc
d02 2014-04-22_12:15:00 calling inc/HALO_EM_FEEDBACK_inline.inc
d02 2014-04-22_12:15:00 module_integrate: back from med_nest_feedback
d01 2014-04-22_12:15:00 module_integrate: calling solve interface
d01 2014-04-22_12:15:00 calling inc/HALO_EM_CHEM_E_5_inline.inc
d01 2014-04-22_12:15:00 calling inc/HALO_EM_MOIST_OLD_E_7_inline.inc
d01 2014-04-22_12:15:00 calling inc/PERIOD_BDY_EM_MOIST_OLD_inline.inc
d01 2014-04-22_12:15:00 calling inc/HALO_EM_A_inline.inc
d01 2014-04-22_12:15:00 calling inc/PERIOD_BDY_EM_A_inline.inc
d01 2014-04-22_12:15:00 calling inc/HALO_EM_PHYS_A_inline.inc
d01 2014-04-22_12:15:00 Top of Radiation Driver
d01 2014-04-22_12:15:00 calling inc/HALO_PWP_inline.inc
d01 2014-04-22_12:15:00 in SFCLAY
d01 2014-04-22_12:15:00 in RUC LSM
-------------- FATAL CALLED ---------------
FATAL CALLED FROM FILE:  module_sf_ruclsm.b  LINE:    6481
  Crash in surface energy budget
-------------------------------------------
Abort(1) on node 8 (rank 8 in comm 0): application called MPI_Abort(MPI_COMM_WORLD, 1) - process 8

Best regards!
cxyiyh
 
Jordan,
if you run with RUC surface scheme (sf_surfacee_physics=3), then num_soil_layers should be either 6 or 9.
Can you change your namelist settings and try again?
 
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