COMPILING ERROR WRFCHEM

[ikhsanmurad]

Hi.
I have problem on compiling wrf chem.
There are issue that I''ve found

/usr/bin/ld: libwrflib.a(module_check_a_mundo.o): in function `__module_check_a_mundo_MOD_check_nml_consistency':
module_check_a_mundo.f90.text+0x53e6): undefined reference to `__module_bep_bem_helper_MOD_nurbm'
/usr/bin/ld: module_check_a_mundo.f90.text+0x153db): undefined reference to `__module_bep_bem_helper_MOD_nurbm'
/usr/bin/ld: module_check_a_mundo.f90.text+0x1efb6): undefined reference to `bep_bem_ndm_'
/usr/bin/ld: module_check_a_mundo.f90.text+0x1efc1): undefined reference to `bep_bem_nz_um_'
/usr/bin/ld: module_check_a_mundo.f90.text+0x1efcc): undefined reference to `bep_bem_ng_u_'
/usr/bin/ld: module_check_a_mundo.f90.text+0x1efd7): undefined reference to `bep_bem_nwr_u_'
/usr/bin/ld: module_check_a_mundo.f90.text+0x1efe2): undefined reference to `bep_bem_nf_u_'
/usr/bin/ld: module_check_a_mundo.f90.text+0x1efed): undefined reference to `bep_bem_ngb_u_'
/usr/bin/ld: module_check_a_mundo.f90.text+0x1eff8): undefined reference to `bep_bem_nbui_max_'
/usr/bin/ld: module_check_a_mundo.f90.text+0x1f003): undefined reference to `bep_bem_ngr_u_'
/usr/bin/ld: module_check_a_mundo.f90.text+0x22925): undefined reference to `bep_bem_ndm_'
/usr/bin/ld: module_check_a_mundo.f90.text+0x22930): undefined reference to `bep_bem_nz_um_'
/usr/bin/ld: module_check_a_mundo.f90.text+0x2293b): undefined reference to `bep_bem_ng_u_'
/usr/bin/ld: module_check_a_mundo.f90.text+0x22946): undefined reference to `bep_bem_nwr_u_'
/usr/bin/ld: module_check_a_mundo.f90.text+0x22951): undefined reference to `bep_bem_nf_u_'
/usr/bin/ld: module_check_a_mundo.f90.text+0x2295c): undefined reference to `bep_bem_ngb_u_'
/usr/bin/ld: module_check_a_mundo.f90.text+0x22967): undefined reference to `bep_bem_nbui_max_'
/usr/bin/ld: module_check_a_mundo.f90.text+0x22972): undefined reference to `bep_bem_ngr_u_'
/usr/bin/ld: module_check_a_mundo.f90.text+0x22982): undefined reference to `bep_ndm_'
/usr/bin/ld: module_check_a_mundo.f90.text+0x2298d): undefined reference to `bep_nz_um_'
/usr/bin/ld: module_check_a_mundo.f90.text+0x22998): undefined reference to `bep_ng_u_'
/usr/bin/ld: module_check_a_mundo.f90.text+0x229a3): undefined reference to `bep_nwr_u_'
/usr/bin/ld: module_check_a_mundo.f90.text+0x229bc): undefined reference to `bep_bem_ndm_'
/usr/bin/ld: module_check_a_mundo.f90.text+0x229c7): undefined reference to `bep_bem_nz_um_'
/usr/bin/ld: module_check_a_mundo.f90.text+0x229d2): undefined reference to `bep_bem_ng_u_'
/usr/bin/ld: module_check_a_mundo.f90.text+0x229dd): undefined reference to `bep_bem_nwr_u_'
/usr/bin/ld: module_check_a_mundo.f90.text+0x229e8): undefined reference to `bep_bem_nf_u_'
/usr/bin/ld: module_check_a_mundo.f90.text+0x229f3): undefined reference to `bep_bem_ngb_u_'
/usr/bin/ld: module_check_a_mundo.f90.text+0x229fe): undefined reference to `bep_bem_nbui_max_'
/usr/bin/ld: module_check_a_mundo.f90.text+0x22a09): undefined reference to `bep_bem_ngr_u_'
/usr/bin/ld: module_check_a_mundo.f90.text+0x22c1b): undefined reference to `bep_ndm_'
/usr/bin/ld: module_check_a_mundo.f90.text+0x22c26): undefined reference to `bep_nz_um_'
/usr/bin/ld: module_check_a_mundo.f90.text+0x22c31): undefined reference to `bep_ng_u_'
/usr/bin/ld: module_check_a_mundo.f90.text+0x22c3c): undefined reference to `bep_nwr_u_'
/usr/bin/ld: module_check_a_mundo.f90.text+0x22c54): undefined reference to `bep_bem_ndm_'
/usr/bin/ld: module_check_a_mundo.f90.text+0x22c5f): undefined reference to `bep_bem_nz_um_'
/usr/bin/ld: module_check_a_mundo.f90.text+0x22c6a): undefined reference to `bep_bem_ng_u_'
/usr/bin/ld: module_check_a_mundo.f90.text+0x22c75): undefined reference to `bep_bem_nwr_u_'
/usr/bin/ld: module_check_a_mundo.f90.text+0x22c80): undefined reference to `bep_bem_nf_u_'
/usr/bin/ld: module_check_a_mundo.f90.text+0x22c8b): undefined reference to `bep_bem_ngb_u_'
/usr/bin/ld: module_check_a_mundo.f90.text+0x22c96): undefined reference to `bep_bem_nbui_max_'
/usr/bin/ld: module_check_a_mundo.f90.text+0x22ca1): undefined reference to `bep_bem_ngr_u_'
/usr/bin/ld: module_check_a_mundo.f90.text+0x22cb1): undefined reference to `bep_ndm_'
/usr/bin/ld: module_check_a_mundo.f90.text+0x22cbc): undefined reference to `bep_nz_um_'
/usr/bin/ld: module_check_a_mundo.f90.text+0x22cc7): undefined reference to `bep_ng_u_'
/usr/bin/ld: module_check_a_mundo.f90.text+0x22cd2): undefined reference to `bep_nwr_u_'
/usr/bin/ld: module_check_a_mundo.f90.text+0x22ce6): undefined reference to `bep_bem_ndm_'
/usr/bin/ld: module_check_a_mundo.f90.text+0x22cf1): undefined reference to `bep_bem_nz_um_'
/usr/bin/ld: module_check_a_mundo.f90.text+0x22cfc): undefined reference to `bep_bem_ng_u_'
/usr/bin/ld: module_check_a_mundo.f90.text+0x22d07): undefined reference to `bep_bem_nwr_u_'
/usr/bin/ld: module_check_a_mundo.f90.text+0x22d12): undefined reference to `bep_bem_nf_u_'
/usr/bin/ld: module_check_a_mundo.f90.text+0x22d1d): undefined reference to `bep_bem_ngb_u_'
/usr/bin/ld: module_check_a_mundo.f90.text+0x22d28): undefined reference to `bep_bem_nbui_max_'
/usr/bin/ld: module_check_a_mundo.f90.text+0x22d33): undefined reference to `bep_bem_ngr_u_'
/usr/bin/ld: module_check_a_mundo.f90.text+0x22d43): undefined reference to `bep_ndm_'
/usr/bin/ld: module_check_a_mundo.f90.text+0x22d4e): undefined reference to `bep_nz_um_'
/usr/bin/ld: module_check_a_mundo.f90.text+0x22d59): undefined reference to `bep_ng_u_'
/usr/bin/ld: module_check_a_mundo.f90.text+0x22d64): undefined reference to `bep_nwr_u_'
/usr/bin/ld: module_check_a_mundo.f90.text+0x25151): undefined reference to `bep_bem_ndm_'
/usr/bin/ld: module_check_a_mundo.f90.text+0x2515c): undefined reference to `bep_bem_nz_um_'
/usr/bin/ld: module_check_a_mundo.f90.text+0x25167): undefined reference to `bep_bem_ng_u_'
/usr/bin/ld: module_check_a_mundo.f90.text+0x25172): undefined reference to `bep_bem_nwr_u_'
/usr/bin/ld: module_check_a_mundo.f90.text+0x2517d): undefined reference to `bep_bem_nf_u_'
/usr/bin/ld: module_check_a_mundo.f90.text+0x25188): undefined reference to `bep_bem_ngb_u_'
/usr/bin/ld: module_check_a_mundo.f90.text+0x25193): undefined reference to `bep_bem_nbui_max_'
/usr/bin/ld: module_check_a_mundo.f90.text+0x2519e): undefined reference to `bep_bem_ngr_u_'
/usr/bin/ld: module_check_a_mundo.f90.text+0x2529b): undefined reference to `bep_ndm_'
/usr/bin/ld: module_check_a_mundo.f90.text+0x252a6): undefined reference to `bep_nz_um_'
/usr/bin/ld: module_check_a_mundo.f90.text+0x252b1): undefined reference to `bep_ng_u_'
/usr/bin/ld: module_check_a_mundo.f90.text+0x252bc): undefined reference to `bep_nwr_u_'
/usr/bin/ld: module_check_a_mundo.f90.text+0x25d29): undefined reference to `bep_ndm_'
/usr/bin/ld: module_check_a_mundo.f90.text+0x25d34): undefined reference to `bep_nz_um_'
/usr/bin/ld: module_check_a_mundo.f90.text+0x25d3f): undefined reference to `bep_ng_u_'
/usr/bin/ld: module_check_a_mundo.f90.text+0x25d4a): undefined reference to `bep_nwr_u_'
/usr/bin/ld: module_check_a_mundo.f90.text+0x25d5e): undefined reference to `bep_bem_ndm_'
/usr/bin/ld: module_check_a_mundo.f90.text+0x25d69): undefined reference to `bep_bem_nz_um_'
/usr/bin/ld: module_check_a_mundo.f90.text+0x25d74): undefined reference to `bep_bem_ng_u_'
/usr/bin/ld: module_check_a_mundo.f90.text+0x25d7f): undefined reference to `bep_bem_nwr_u_'
/usr/bin/ld: module_check_a_mundo.f90.text+0x25d8a): undefined reference to `bep_bem_nf_u_'
/usr/bin/ld: module_check_a_mundo.f90.text+0x25d95): undefined reference to `bep_bem_ngb_u_'
/usr/bin/ld: module_check_a_mundo.f90.text+0x25da0): undefined reference to `bep_bem_nbui_max_'
/usr/bin/ld: module_check_a_mundo.f90.text+0x25dab): undefined reference to `bep_bem_ngr_u_'
/usr/bin/ld: module_check_a_mundo.f90.text+0x2701d): undefined reference to `bep_ndm_'
/usr/bin/ld: module_check_a_mundo.f90.text+0x27028): undefined reference to `bep_nz_um_'
/usr/bin/ld: module_check_a_mundo.f90.text+0x27033): undefined reference to `bep_ng_u_'
/usr/bin/ld: module_check_a_mundo.f90.text+0x2703e): undefined reference to `bep_nwr_u_'
/usr/bin/ld: libwrflib.a(chem_driver.o): in function `chem_driver_._omp_fn.0':
chem_driver.f90.text+0x8bef): undefined reference to `__module_cam_support_MOD_cam_mam_aerosols'
/usr/bin/ld: chem_driver.f90.text+0x9827): undefined reference to `__module_cu_camzm_driver_MOD_zm_conv_tend_2'
/usr/bin/ld: chem_driver.f90.text+0x11a5f): undefined reference to `__module_cam_support_MOD_numgas_mam'
/usr/bin/ld: chem_driver.f90.text+0x13377): undefined reference to `__module_cam_support_MOD_numgas_mam'
/usr/bin/ld: chem_driver.f90.text+0x1677f): undefined reference to `__module_cam_support_MOD_cam_mam_aerosols'
/usr/bin/ld: chem_driver.f90.text+0x194dd): undefined reference to `__module_cam_support_MOD_cam_mam_aerosols'
/usr/bin/ld: chem_driver.f90.text+0x19683): undefined reference to `__module_cam_support_MOD_cam_mam_aerosols'
/usr/bin/ld: libwrflib.a(chem_driver.o): in function `chem_driver_':
chem_driver.f90.text+0x1bade): undefined reference to `__module_cam_support_MOD_numgas_mam'
/usr/bin/ld: chem_driver.f90.text+0x1db8c): undefined reference to `__module_cam_support_MOD_numgas_mam'
/usr/bin/ld: chem_driver.f90.text+0x1dbb0): undefined reference to `__module_cam_support_MOD_cam_mam_aerosols'
/usr/bin/ld: chem_driver.f90.text+0x21a1e): undefined reference to `__module_cam_support_MOD_cam_mam_aerosols'
/usr/bin/ld: chem_driver.f90.text+0x21ada): undefined reference to `__module_cam_support_MOD_numgas_mam'
/usr/bin/ld: libwrflib.a(emissions_driver.o): in function `__module_emissions_driver_MOD_emissions_driver':
emissions_driver.f90.text+0x4e84): undefined reference to `__shr_megan_mod_MOD_shr_megan_mechcomps_n'
/usr/bin/ld: emissions_driver.f90.text+0x4f26): undefined reference to `__shr_megan_mod_MOD_shr_megan_mechcomps'
/usr/bin/ld: emissions_driver.f90.text+0x4f2d): undefined reference to `__shr_megan_mod_MOD_shr_megan_mechcomps'
/usr/bin/ld: emissions_driver.f90.text+0x4fbe): undefined reference to `__shr_megan_mod_MOD_shr_megan_mechcomps'
/usr/bin/ld: emissions_driver.f90.text+0x4ff7): undefined reference to `__shr_megan_mod_MOD_shr_megan_mechcomps'
/usr/bin/ld: libwrflib.a(dry_dep_driver.o): in function `__module_dry_dep_driver_MOD_dry_dep_driver':
dry_dep_driver.f90.text+0xc24): undefined reference to `__module_cam_support_MOD_pcnst_runtime'
/usr/bin/ld: dry_dep_driver.f90.text+0xf6f): undefined reference to `__module_data_cam_mam_asect_MOD_lptr_chem_to_q'
/usr/bin/ld: dry_dep_driver.f90.text+0xf7b): undefined reference to `__module_data_cam_mam_asect_MOD_lptr_chem_to_q'
/usr/bin/ld: dry_dep_driver.f90.text+0x1258): undefined reference to `__modal_aero_data_MOD_lmassptr_amode'
/usr/bin/ld: dry_dep_driver.f90.text+0x125f): undefined reference to `__modal_aero_data_MOD_numptr_amode'
/usr/bin/ld: dry_dep_driver.f90.text+0x126b): undefined reference to `__modal_aero_data_MOD_nspec_amode'
/usr/bin/ld: libwrflib.a(solve_em.o): in function `solve_em_._omp_fn.44':
solve_em.f90.text+0x1ac39): undefined reference to `__module_microphysics_zero_out_MOD_microphysics_zero_outa'
/usr/bin/ld: solve_em.f90.text+0x1acaf): undefined reference to `__module_microphysics_zero_out_MOD_microphysics_zero_outa'
/usr/bin/ld: solve_em.f90.text+0x1ad25): undefined reference to `__module_microphysics_zero_out_MOD_microphysics_zero_outa'
/usr/bin/ld: solve_em.f90.text+0x1ad9b): undefined reference to `__module_microphysics_zero_out_MOD_microphysics_zero_outa'
/usr/bin/ld: solve_em.f90.text+0x1b1e9): undefined reference to `__module_microphysics_zero_out_MOD_microphysics_zero_outb'
/usr/bin/ld: solve_em.f90.text+0x1b25f): undefined reference to `__module_microphysics_zero_out_MOD_microp

You can refer attachment compiling.
tq

 

[jordanschnell]

Hi,

Apologies if you have already done this, but it looks as though this is not the first time the model has been compiled (based on KPP). Can you perform a "./clean -a" and then recompile to see if you get the same error? Thanks.

Jordan

 

[ikhsanmurad]

Hi Jordan.
I''ve already done ./clean -a.
I'm using the platform Debian.
so, i've uninstall flex and install old flow {sudo apt-get install old-flex}.
so, when im compiling. its OK.

thank you

Ikhsan