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Error compiling on Cheyenne


New member
I am trying to compile WRF Chem 4.5 on Cheyenne and facing issues. The first thing I noticed is that the compilations fails in the beginning saying:

compile kpp
make[1]: Entering directory '/glade/scratch/user/WRF-latest/chem/KPP/kpp/kpp-2.1/src'
/usr/bin/yacc –d scan.y
/usr/bin/bison: extra operand ‘scan.y’
Try `/usr/bin/bison --help' for more information.
Makefile:81: recipe for target '' failed
make[1]: *** [] Error 1
make[1]: Leaving directory '/glade/scratch/user/WRF-latest/chem/KPP/kpp/kpp-2.1/src'

Then, I copied two files ( and from a previous installation to chem/KPP/kpp/kpp-2.1/src and then it proceeded further. But it eventually didn't compile. Below is the first instance of Error I found.

sed -f ../../../../arch/standard.sed write_decomp.F > write_decomp.b
rm -f write_decomp.b
ifort -c -O3 -ip -fp-model precise -w -ftz -align all -fno-alias -FR -convert big_endian -real-size `expr 8 \* 4` -i4 write_decomp.f90
ifort -o write_decomp.exe module_kpp_cb05_sorg_aq_Precision.o module_kpp_cb05_sorg_aq_Parameters.o module_kpp_cb05_sorg_aq_JacobianSP.o write_decomp.o
/usr/lib64/gcc/x86_64-suse-linux/4.8/../../../../x86_64-suse-linux/bin/ld: write_decomp.o: in function `MAIN__':
write_decomp.f90:(.text+0x7c8): undefined reference to `cb05_sorg_vbs_aq_jacobiansp_mp_lu_diag_'

I am also attaching the compile log and my environment for you. I will really appreciate your help in fixing the issue.


  • compile.log
    1.7 MB · Views: 2
  • env.log
    14 KB · Views: 5