error in make prep_chem_sources (version 1.5)

[dbp]

To whom it may concern,

I get in touch in order to get some assistance for my WRF-CHEM compilation. I found this email address in a topic inside the forum WRF model coupled to Chemistry (WRF-Chem):
Running Prep-chem-src problems
and I would really appreciate your help. My final intention is to simulate methane emissions, so I would be interested in knowing the best configuration of prep_chem for that purpose.

The state I'm at is the following:

• I have a Linux Machine:
  • Linux 20.04.1-Ubuntu
  • x86_64
  • CPU: AMD Ryzen 5 2600X Six-Core Processor
  • 32GB RAM
• I have downloaded the WRF, WPS source code from its latest version:
  • git clone --recurse-submodules GitHub - wrf-model/WRF: The official repository for the Weather Research and Forecasting (WRF) model
  • git clone GitHub - wrf-model/WPS: The official repository for the WRF Preprocessing System (WPS)
• I have compiled the code following the tutorial:
  • Compiling WRF

• And for the particular case of WRF-CHEM,
  • https://ruc.noaa.gov/wrf/wrf-chem/wrf_tutorial_exercises_v35/compiling_code.html
• I chose the option 34 in the configure step (dmpar)
• and option 1 for nesting (basic).
• then, ./compile em_real >& compile.log &
• and ./compile emi_conv >& emcompile.log

    with no errors. (see attached files)

• after reading tutorials (https://ruc.noaa.gov/wrf/wrf-chem/Emission_guide.pdf) and forums, I understand that I need to install the prep_chem_sources module. So I follow the steps:
  • first, install hdf5 libraries:

            wget https://support.hdfgroup.org/ftp/HDF5/releases/hdf5-1.10/hdf5-1.10.4/src/hdf5-1.10.4.tar.gz

​

• • tar xf hdf5-1.10.4.tar.gz
    cd hdf5-1.10.4/
    ./configure —prefix=${DIR}/hdf5-1.10.4 —enable-fortran —with-zlib=${DIR}/grib2 —disable-netcdf
    make
    make install
• then, download prep_chem_sources from: ftp://aftp.fsl.noaa.gov/divisions/taq/global_emissions
  Use of version 1.5
• modify the proper file: include.mk.gfortran.wrf (attached, with extension .txt)
• and: make OPT=gfortran.wrf CHEM=RADM_WRF_FIM AER=SIMPLE
• I get the following error (complete output in file attached prepchem.log):
  
  """
  841 | 'AGRICULTURE',&| 1Error: Different CHARACTER lengths (11/6) in array constructor at (1)edgar_emissions.f90:894:61:894 | filename=trim(edgar_data_dir)//"/"//trim(PREFIX)//trim(setor(isetor))//trim(suffix)| 1Error: Function ‘setor’ at (1) has no IMPLICIT typeedgar_emissions.f90:916:16:916 | if(trim(setor(isetor)) .eq. 'AGRICULTURE' .and. trim(spc_name(ispc)) .ne. 'NH3') cycle| 1Error: Function ‘setor’ at (1) has no IMPLICIT typeedgar_emissions.f90:923:30:923 | print*,trim(setor(isetor))," ",trim(dsetname),i, " MAX ",maxval(src_dummy,:,i))| 1Error: Function ‘setor’ at (1) has no IMPLICIT typeedgar_emissions.f90:924:30:924 | print*,trim(setor(isetor))," ",trim(dsetname),i, " MIN ",minval(src_dummy,:,i))| 1Error: Function ‘setor’ at (1) has no IMPLICIT typemake: *** [depend_prepsrc.mk:480: edgar_emissions.o] Error 1
  """

I thank you in advance for taking time in reading my questions and I hope you find time also to reply.
Best wishes,
Diego

 

[jordanschnell]

@Whatheway - looks like you helped another user with a similar issue (Error compiling prep_chem_src) - problem with gcc version?

 

[patelviral1195]

hello, i got similar errors, kindly help us as possible as soon...

..........................................................................................
errors :
..........................................................................................

edgar_emissions.f90:841:15:

841 | 'AGRICULTURE',&
| 1
Error: Different CHARACTER lengths (11/6) in array constructor at (1)
edgar_emissions.f90:894:61:

894 | filename=trim(edgar_data_dir)//"/"//trim(PREFIX)//trim(setor(isetor))//trim(suffix)
| 1
Error: Function ‘setor’ at (1) has no IMPLICIT type
edgar_emissions.f90:916:16:

916 | if(trim(setor(isetor)) .eq. 'AGRICULTURE' .and. trim(spc_name(ispc)) .ne. 'NH3') cycle
| 1
Error: Function ‘setor’ at (1) has no IMPLICIT type
edgar_emissions.f90:923:30:

923 | print*,trim(setor(isetor))," ",trim(dsetname),i, " MAX ",maxval(src_dummy,:,i))
| 1
Error: Function ‘setor’ at (1) has no IMPLICIT type
edgar_emissions.f90:924:30:

924 | print*,trim(setor(isetor))," ",trim(dsetname),i, " MIN ",minval(src_dummy,:,i))
| 1
Error: Function ‘setor’ at (1) has no IMPLICIT type
make: *** [depend_prepsrc.mk:480: edgar_emissions.o] Error 1

 

[dbp]

Hi all,

after personal communication with atende.cptec@inpe.br, (http://brams.cptec.inpe.br/)

I was suggested to try the following:
"Please, change file PREP-CHEM-SRC-1.5/src/edgar_emissions.f90 to file
edgar_emissions.f90 at attachment" (attached file), which worked.

The version for gfortran I'm using is: 9.4.0

Thanks for the help,

 

[llsalazardom]

Hello

I am trying to install the prep-chem_sources 1.5 with the version for gfortran 9.4.0

I have the same error mentioned by @patelviral1195 , I have tried what @dbp suggests but it keeps showing me the same error

Has anyone been able to solve it in another way?



cp -f ../../src/edgar_emissions.f90 edgar_emissions.f90
gfortran -c -Xpreprocessor -DRADM_WRF_FIM -O2 -fconvert=big-endian -frecord-marker=4 -I../../aux_src/utils/include -I/home/luis/Build_WRF-SFIRE/Library/include -I/home/luis/Build_WRF-SFIRE/Library/include edgar_emissions.f90
edgar_emissions.f90:841:15:

841 | 'AGRICULTURE',&
| 1
Error: Different CHARACTER lengths (11/6) in array constructor at (1)
edgar_emissions.f90:894:61:

894 | filename=trim(edgar_data_dir)//"/"//trim(PREFIX)//trim(setor(isetor))//trim(suffix)
| 1
Error: Function ‘setor’ at (1) has no IMPLICIT type
edgar_emissions.f90:916:16:

916 | if(trim(setor(isetor)) .eq. 'AGRICULTURE' .and. trim(spc_name(ispc)) .ne. 'NH3') cycle
| 1
Error: Function ‘setor’ at (1) has no IMPLICIT type
edgar_emissions.f90:923:30:

923 | print*,trim(setor(isetor))," ",trim(dsetname),i, " MAX ",maxval(src_dummy,:,i))
| 1
Error: Function ‘setor’ at (1) has no IMPLICIT type
edgar_emissions.f90:924:30:

924 | print*,trim(setor(isetor))," ",trim(dsetname),i, " MIN ",minval(src_dummy,:,i))
| 1
Error: Function ‘setor’ at (1) has no IMPLICIT type
make: *** [depend_prepsrc.mk:480: edgar_emissions.o] Error 1

 

[ehsantaghizadeh]

Hi every body,
I have the same issue as @llsalazardom and @patelviral1195. I also did what @dbp suggested, but it didn't fix the problem.
I'll be thankful for any help.

 

[William.Hatheway]

How to install prep-chem-src v1.5

#!/bin/bash # Basic Package Management for WRF-CHEM Tools and Processors sudo apt-get update sudo apt-get upgrade sudo apt install gcc gfortran g++ libtool automake autoconf make m4 default-jre default-jdk csh ksh git build-essential unzip mlocate byacc flex #Directory Listings export...

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