FATAL CALLED FROM FILE: <stdin> LINE: 5817 invalid parent id for domain 2

L

loly_

New member
Hi guys.

Whenever I run wrf.exe it gets this error:

taskid: 0 hostname: XXXXXX
module_io_quilt_old.F 2931 T
-------------- FATAL CALLED ---------------
FATAL CALLED FROM FILE: <stdin> LINE: 5817
invalid parent id for domain 2
-------------------------------------------
 

Attachments

Hi,
Do you get this error when you're running wrf.exe or when you run real.exe? Can you attach the full rsl.*.0000 files? It looks like you've only included the final few lines. Please also let me know which version of WPS/WRF you are using. Thanks!
 
Hi,
version of WPS/WRF is 4.5
This is the error file generated when running the command real.exe. These are the complete files.
 
Hi,
Okay I took a closer look at your namelist.input file, and I'm not sure why this would be causing that particular error, but the issue is this line:
Code: 
BOTTOM-TOP_GRID_DIMENSION  = 34,

That is not a namelist parameter, so you'll need to remove that. You'll then need to change num_metgrid_levels to = 34. Not related to this error, you also need to increase your e_vert settings. Try using something like = 45, 45.
 
So, I need the new problem


DYNAMICS OPTION: Eulerian Mass Coordinate
alloc_space_field: domain 1 , 1126949440 bytes allocated
d01 2023-06-15_12:00:00 Yes, this special data is acceptable to use: OUTPUT FROM METGRID V4.5
d01 2023-06-15_12:00:00 Input data is acceptable to use: met_em.d01.2023-06-15_12:00:00.nc
metgrid input_wrf.F first_date_input = 2023-06-15_12:00:00
metgrid input_wrf.F first_date_nml = 2023-06-15_12:00:00
d01 2023-06-15_12:00:00 Timing for input 0 s.
d01 2023-06-15_12:00:00 flag_soil_layers read from met_em file is 1
d01 2023-06-15_12:00:00 Turning off use of MAX WIND level data in vertical interpolation
d01 2023-06-15_12:00:00 Turning off use of TROPOPAUSE level data in vertical interpolation
Max map factor in domain 1 = 1.21. Scale the dt in the model accordingly.
Using sfcprs3 to compute psfc
d01 2023-06-15_12:00:00 No average surface temperature for use with inland lakes
Assume Noah LSM input
d01 2023-06-15_12:00:00 forcing artificial silty clay loam at 2 points, out of 33432
d01 2023-06-15_12:00:00 Timing for processing 1 s.
d01 2023-06-15_12:00:00 Timing for output 2 s.
d01 2023-06-15_12:00:00 Timing for loop # 1 = 3 s.
 

Attachments

According to your rsl.* files, your real.exe ran correctly.

Code: 
d01 2023-06-16_12:00:00 real_em: SUCCESS COMPLETE REAL_EM INIT
 
kwerner said:
Hi,
Do you get this error when you're running wrf.exe or when you run real.exe? Can you attach the full rsl.*.0000 files? It looks like you've only included the final few lines. Please also let me know which version of WPS/WRF you are using. Thanks!
Click to expand...
Mr Kwerner, I am encountering the same issue when preparing to simulate the process of dust transport. Please review the attached files. Could you please help me identify and resolve the problem? Thank you.
 

Attachments

@Liangcheng Qiu,
As with the other user, the issue was related to a namelist error (although the error message isn't helpful in determining that). I haven't looked through your entire namelist, but I do notice that you have all of your chemistry variables listed in the &domains namelist record. It looks like you have them in both places. Make sure to put the variables in the correct location in your namelist. If you have any doubts, you can search each variable within the files inside the Registry directory. For e.g.,

Code: 
grep -i kemit *
(make sure to use the "-i" so that your search is not case-sensitive)

and that gives
Code: 
registry.chem:rconfig   integer    kemit   namelist,chem    1      9       irh     "kemit"   ""      ""

You can see that the 4th column shows that it is a namelist variable, and specifically in the &chem section of the namelist.
 
I have also encountered same error during running real.exe. I am using CFSv2 hindcast data (TDS Catalog). My surface and pressure files are in two different files.

1 taskid: 0 hostname: wrfku
2 module_io_quilt_old.F 2931 T
3 -------------- FATAL CALLED ---------------
4 FATAL CALLED FROM FILE: <stdin> LINE: 5867
5 invalid parent id for domain 2
6 -------------------------------------------


Any suggestion and solution please!
 

Attachments

Prolay Saha said:
I have also encountered same error during running real.exe. I am using CFSv2 hindcast data (TDS Catalog). My surface and pressure files are in two different files.

1 taskid: 0 hostname: wrfku
2 module_io_quilt_old.F 2931 T
3 -------------- FATAL CALLED ---------------
4 FATAL CALLED FROM FILE: <stdin> LINE: 5867
5 invalid parent id for domain 2
6 -------------------------------------------


Any suggestion and solution please!
Click to expand...
Hi, As with the other users on this thread, the issue is related to a couple of your namelist settings. The following two variables are set as
Code: 
num_metgrid_levels                  = 38, 38,
num_metgrid_soil_levels             = 4, 4,

However, WRF only accepts a single input for each of those, so they should be changed to:
Code: 
num_metgrid_levels                  = 38
num_metgrid_soil_levels             = 4
 
Hi Kwerner,

Thank you for your promt reply and suggestion. After correcting to single input, num_metgrid_levels and num_metgrid_soil_levels, it worked for me.
 
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