Hi,
There are 2 ways to do this:
1) Go into the WRF/Registry/Registry.EM_COMMON file, and then look for the variables you don’t want. You can remove the ‘h’ from out I/O column. After you do this for all of the variables you want removed, you will need to save the file, go back to the WRF/ directory, issue a ‘clean -a’ and then reconfigure and recompile
2) You can also use the Runtime I/O option, which will allow you to add a couple lines to your namelist, and create a text file that the model will read when it is run. With this method, you don't have to recompile the code, but you have to be careful to type everything correctly, and have no spaces in the text file. You can read about it here:
http://www2.mmm.ucar.edu/wrf/users/docs/user_guide_v4/v4.1/users_guide_chap5.html#runtimeio
Just be careful removing variables. If you ever want to go back and plot specific things, or if you will use the files for anything else later, you may be missing something you didn't realize you would need.