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MPAS segmentation error when running 30-km resolution though successful in 120-km.

F

f930139

New member
Hi everyone
I am running MPAS-A 7.0 with ungrib ERA5 data (30-km meshes), but the ./atmosphere_model failed when outputing output.nc and diag.nc. slurm script shows 70220 lines of " Flerchinger USEd in NEW version. Iterations= 10" and then Segmentation fault.
There's no error when ./init_atmosphere_model, including geog data, met data and sst update data.
I also use the same ungrib ERA5 data to run 120-km meshes, and it works well (empty slurm script).

I guess the problem lies in inital data, but I cannot find where the problem is.
Did anyone face with the same problem before? Is it just simply related to the MPAS version, or the 30-km meshes are problematic?

30-km meshes are downloaded from MPAS-Atmosphere mesh downloads
 

Attachments

  • namelist.init_atmosphere(init_met).txt
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  • namelist.init_atmosphere(init_sst).txt
    1.4 KB · Views: 0
  • namelist.init_atmosphere(static).txt
    1.4 KB · Views: 0
  • streams.init_atmosphere(init_met).txt
    952 bytes · Views: 0
  • streams.init_atmosphere(init_sst).txt
    952 bytes · Views: 0
  • streams.init_atmosphere(static).txt
    952 bytes · Views: 0
  • namelist.atmosphere.txt
    1.8 KB · Views: 4
  • streams.atmosphere.txt
    1.6 KB · Views: 1
  • slurm-5799294.out.txt
    706.9 KB · Views: 2
Would you please upload your ERA5 data of me to take a look? Did you use the same ERA5 data to run 120-km mesh successfully? Thanks.
 
f930139 said:
Hi everyone
I am running MPAS-A 7.0 with ungrib ERA5 data (30-km meshes), but the ./atmosphere_model failed when outputing output.nc and diag.nc. slurm script shows 70220 lines of " Flerchinger USEd in NEW version. Iterations= 10" and then Segmentation fault.
There's no error when ./init_atmosphere_model, including geog data, met data and sst update data.
I also use the same ungrib ERA5 data to run 120-km meshes, and it works well (empty slurm script).

I guess the problem lies in inital data, but I cannot find where the problem is.
Did anyone face with the same problem before? Is it just simply related to the MPAS version, or the 30-km meshes are problematic?

30-km meshes are downloaded from MPAS-Atmosphere mesh downloads
Click to expand...
Hi
I have had the same issue.
Can you tell me what is the system configuration that you are working on? like how many cores are you working on and also the memory (RAM).
 
gaurav said:
Hi
I have had the same issue.
Can you tell me what is the system configuration that you are working on? like how many cores are you working on and also the memory (RAM).
Click to expand...
I solved this segmentation problem by changing dt from 720.0 to 180.0 seconds. I'm not sure if this can solve your problem as well.
I am working on 16 nodes and 48 tasks each node.
 
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