hello,
I am trying to transition to wrf 4.3 but am getting segmentation fault errors. I am using cheyenne and created all wrf input files with WPS 4.3
WRF integrates for about 10 minutes and then crashes with errors like this:
MPT ERROR: Rank 392(g:392) received signal SIGSEGV(11).
** there are no cfl errors
the additional problem is that the same exact configuration and wrf input files works fine with version 4.2.2.
If possible to take a look at the my runs, the paths are:
** version 4.3
/glade/work/cjones/WRF/test/em_labfees
** version 4.2.2
/glade/work/cjones/WRF-422/test/em_labfees/
any suggestion or ideas are greatly appreciated.
my namelist.input files i below.
Cheers,
Charles.
---
&time_control
run_days = 0,
run_hours = 0,
run_minutes = 0,
run_seconds = 0,
start_year = 2018,2018,2018,2018,
start_month = 11, 11, 11, 11,
start_day = 06, 06, 06, 06,
start_hour = 00, 00, 00, 00,
start_minute = 00, 00, 00, 00,
start_second = 00, 00, 00, 00,
end_year = 2018,2018,2018,2018,
end_month = 11, 11,11,11,
end_day = 06, 06, 08, 08,
end_hour = 06, 06, 00, 00,
end_minute = 00, 00, 00, 00,
end_second = 00, 00, 00, 00,
interval_seconds = 3600,
input_from_file = .true., .true., .true., .true.,
history_interval = 720, 60, 60, 60,
frames_per_outfile = 999999, 999999, 500, 24,
auxinput1_inname = '/glade/scratch/cjones/labfees/prod/metgrid/met_em.d<domain>.<date>',
history_outname = '/glade/scratch/cjones/labfees/prod/camp/245-1.5km/wrfout_d<domain>_<date>',
adjust_output_times = .true.,
restart = .false.,
restart_interval = 7200,
write_hist_at_0h_rst = .true.,
auxinput4_inname = "wrflowinp_d<domain>"
auxinput4_interval = 60, 60, 180, 360,
io_form_auxhist23 = 2,
io_form_auxinput4 = 2,
all_ic_times = .false.,
io_form_history = 2,
io_form_restart = 102,
io_form_input = 2,
io_form_boundary = 2,
debug_level = 0,
/
&domains
time_step = 30,
time_step_fract_num = 0,
time_step_fract_den = 1,
max_dom = 1,
e_we = 831, 746, 796, 259,
e_sn = 881, 766, 787, 235,
e_vert = 55, 55, 55, 55,
p_top_requested = 5000,
num_metgrid_levels = 38,
num_metgrid_soil_levels = 4,
interp_type = 2,
extrap_type = 2,
t_extrap_type = 2,
lowest_lev_from_sfc = .false.
use_levels_below_ground = .true.
use_surface = .true.
lagrange_order = 1,
force_sfc_in_vinterp = 1,
zap_close_levels = 500,
dx = 7500, 1500, 1600,
dy = 7500, 1500, 1600,
grid_id = 1, 2, 3, 4,
parent_id = 0, 1, 2, 3,
i_parent_start = 1, 340, 132, 68,
j_parent_start = 1, 325, 105, 64,
parent_grid_ratio = 1, 5, 3, 3,
parent_time_step_ratio = 1, 5, 3, 3,
feedback = 1,
smooth_option = 0,
!nproc_x = 36,
!nproc_y = 72,
/
&physics
mp_physics = 6, 6, 6, 6,
ra_lw_physics = 4, 4, 4, 4,
ra_sw_physics = 4, 4, 4, 4,
radt = 10, 10, 10, 10,
sf_sfclay_physics = 2, 2, 5, 5,
sf_surface_physics = 4, 4, 4, 4,
bl_pbl_physics = 5, 5, 5, 5,
grav_settling = 2, 2, 2, 2,
bldt = 0, 0, 0, 0,
cu_physics = 6, 0, 0, 0,
kfeta_trigger = 1,
cudt = 0, 0, 0, 0,
ishallow = 0,
shcu_physics = 0, 0, 0, 0,
isfflx = 1,
ifsnow = 0,
icloud = 1,
cu_rad_feedback = .true., .true., .true., .true.,
cu_diag = 0,
topo_wind = 0, 0, 0, 0,
sf_surface_mosaic = 0,
mosaic_cat = 3,
slope_rad = 0, 1, 0, 1,
topo_shading = 0, 1, 1, 1,
shadlen = 25000.,
surface_input_source = 1,
num_soil_layers = 4,
! num_land_cat = 20,
sst_update = 1,
usemonalb = .true.,
tmn_update = 1,
lagday = 150,
sst_skin = 1,
sf_urban_physics = 0, 0, 0,
cam_abs_freq_s = 21600,
levsiz = 59,
paerlev = 29,
bucket_mm = 100.0,
bucket_J = 1.e9,
do_radar_ref = 1,
/
&noah_mp
dveg = 4,
opt_crs = 1,
opt_btr = 1,
opt_run = 1,
opt_sfc = 1,
opt_frz = 1,
opt_inf = 1,
opt_rad = 3,
opt_alb = 2,
opt_snf = 1,
opt_tbot = 2,
opt_stc = 1,
/
&fdda
grid_fdda = 1, 0, 0, 0,
gfdda_inname = "wrffdda_d<domain>",
gfdda_end_h = 99999999, 4320, 0, 0,
gfdda_interval_m = 60, 360, 0, 0,
fgdt = 0, 0, 0, 0,
fgdtzero = 0, 0, 0, 0,
if_no_pbl_nudging_uv = 0, 1, 0, 0,
if_no_pbl_nudging_t = 0, 1, 0, 0,
if_no_pbl_nudging_q = 0, 1, 0, 0,
if_zfac_uv = 0, 0, 0, 0,
k_zfac_uv = 0, 0, 0, 0,
if_zfac_t = 0, 0, 0, 0,
k_zfac_t = 0, 0, 0, 0,
if_zfac_q = 0, 0, 0, 0,
k_zfac_q = 0, 0, 0, 0,
guv = 0.0003, 0.0003, 0,
gt = 0.0003, 0.0003, 0,
gq = 0.0003, 0.0003, 0,
if_ramping = 1,
dtramp_min = 60.0,
io_form_gfdda = 2,
/
&dynamics
w_damping = 0,
diff_opt = 2,
km_opt = 4,
hybrid_opt = 0,
etac = 0.2,
diff_6th_opt = 0, 0, 0, 0,
diff_6th_factor = 0.12, 0.12, 0.12, 0.12,
base_temp = 300.
damp_opt = 3,
zdamp = 5000., 5000., 5000., 5000.,
dampcoef = 0.2, 0.2, 0.2, 0.2,
khdif = 0, 0, 0, 0,
kvdif = 0, 0, 0, 0,
non_hydrostatic = .true., .true., .true., .true.,
moist_adv_opt = 1, 1, 1, 1,
scalar_adv_opt = 1, 1, 1, 1,
/
&bdy_control
spec_bdy_width = 5,
spec_zone = 1,
relax_zone = 4,
specified = .true., .false., .false., .false.,
nested = .false., .true., .true., .true.,
/
&grib2
/
&namelist_quilt
nio_tasks_per_group = 0,
nio_groups = 1,
! nio_tasks_per_group = 36,
! nio_groups = 12,
/
I am trying to transition to wrf 4.3 but am getting segmentation fault errors. I am using cheyenne and created all wrf input files with WPS 4.3
WRF integrates for about 10 minutes and then crashes with errors like this:
MPT ERROR: Rank 392(g:392) received signal SIGSEGV(11).
** there are no cfl errors
the additional problem is that the same exact configuration and wrf input files works fine with version 4.2.2.
If possible to take a look at the my runs, the paths are:
** version 4.3
/glade/work/cjones/WRF/test/em_labfees
** version 4.2.2
/glade/work/cjones/WRF-422/test/em_labfees/
any suggestion or ideas are greatly appreciated.
my namelist.input files i below.
Cheers,
Charles.
---
&time_control
run_days = 0,
run_hours = 0,
run_minutes = 0,
run_seconds = 0,
start_year = 2018,2018,2018,2018,
start_month = 11, 11, 11, 11,
start_day = 06, 06, 06, 06,
start_hour = 00, 00, 00, 00,
start_minute = 00, 00, 00, 00,
start_second = 00, 00, 00, 00,
end_year = 2018,2018,2018,2018,
end_month = 11, 11,11,11,
end_day = 06, 06, 08, 08,
end_hour = 06, 06, 00, 00,
end_minute = 00, 00, 00, 00,
end_second = 00, 00, 00, 00,
interval_seconds = 3600,
input_from_file = .true., .true., .true., .true.,
history_interval = 720, 60, 60, 60,
frames_per_outfile = 999999, 999999, 500, 24,
auxinput1_inname = '/glade/scratch/cjones/labfees/prod/metgrid/met_em.d<domain>.<date>',
history_outname = '/glade/scratch/cjones/labfees/prod/camp/245-1.5km/wrfout_d<domain>_<date>',
adjust_output_times = .true.,
restart = .false.,
restart_interval = 7200,
write_hist_at_0h_rst = .true.,
auxinput4_inname = "wrflowinp_d<domain>"
auxinput4_interval = 60, 60, 180, 360,
io_form_auxhist23 = 2,
io_form_auxinput4 = 2,
all_ic_times = .false.,
io_form_history = 2,
io_form_restart = 102,
io_form_input = 2,
io_form_boundary = 2,
debug_level = 0,
/
&domains
time_step = 30,
time_step_fract_num = 0,
time_step_fract_den = 1,
max_dom = 1,
e_we = 831, 746, 796, 259,
e_sn = 881, 766, 787, 235,
e_vert = 55, 55, 55, 55,
p_top_requested = 5000,
num_metgrid_levels = 38,
num_metgrid_soil_levels = 4,
interp_type = 2,
extrap_type = 2,
t_extrap_type = 2,
lowest_lev_from_sfc = .false.
use_levels_below_ground = .true.
use_surface = .true.
lagrange_order = 1,
force_sfc_in_vinterp = 1,
zap_close_levels = 500,
dx = 7500, 1500, 1600,
dy = 7500, 1500, 1600,
grid_id = 1, 2, 3, 4,
parent_id = 0, 1, 2, 3,
i_parent_start = 1, 340, 132, 68,
j_parent_start = 1, 325, 105, 64,
parent_grid_ratio = 1, 5, 3, 3,
parent_time_step_ratio = 1, 5, 3, 3,
feedback = 1,
smooth_option = 0,
!nproc_x = 36,
!nproc_y = 72,
/
&physics
mp_physics = 6, 6, 6, 6,
ra_lw_physics = 4, 4, 4, 4,
ra_sw_physics = 4, 4, 4, 4,
radt = 10, 10, 10, 10,
sf_sfclay_physics = 2, 2, 5, 5,
sf_surface_physics = 4, 4, 4, 4,
bl_pbl_physics = 5, 5, 5, 5,
grav_settling = 2, 2, 2, 2,
bldt = 0, 0, 0, 0,
cu_physics = 6, 0, 0, 0,
kfeta_trigger = 1,
cudt = 0, 0, 0, 0,
ishallow = 0,
shcu_physics = 0, 0, 0, 0,
isfflx = 1,
ifsnow = 0,
icloud = 1,
cu_rad_feedback = .true., .true., .true., .true.,
cu_diag = 0,
topo_wind = 0, 0, 0, 0,
sf_surface_mosaic = 0,
mosaic_cat = 3,
slope_rad = 0, 1, 0, 1,
topo_shading = 0, 1, 1, 1,
shadlen = 25000.,
surface_input_source = 1,
num_soil_layers = 4,
! num_land_cat = 20,
sst_update = 1,
usemonalb = .true.,
tmn_update = 1,
lagday = 150,
sst_skin = 1,
sf_urban_physics = 0, 0, 0,
cam_abs_freq_s = 21600,
levsiz = 59,
paerlev = 29,
bucket_mm = 100.0,
bucket_J = 1.e9,
do_radar_ref = 1,
/
&noah_mp
dveg = 4,
opt_crs = 1,
opt_btr = 1,
opt_run = 1,
opt_sfc = 1,
opt_frz = 1,
opt_inf = 1,
opt_rad = 3,
opt_alb = 2,
opt_snf = 1,
opt_tbot = 2,
opt_stc = 1,
/
&fdda
grid_fdda = 1, 0, 0, 0,
gfdda_inname = "wrffdda_d<domain>",
gfdda_end_h = 99999999, 4320, 0, 0,
gfdda_interval_m = 60, 360, 0, 0,
fgdt = 0, 0, 0, 0,
fgdtzero = 0, 0, 0, 0,
if_no_pbl_nudging_uv = 0, 1, 0, 0,
if_no_pbl_nudging_t = 0, 1, 0, 0,
if_no_pbl_nudging_q = 0, 1, 0, 0,
if_zfac_uv = 0, 0, 0, 0,
k_zfac_uv = 0, 0, 0, 0,
if_zfac_t = 0, 0, 0, 0,
k_zfac_t = 0, 0, 0, 0,
if_zfac_q = 0, 0, 0, 0,
k_zfac_q = 0, 0, 0, 0,
guv = 0.0003, 0.0003, 0,
gt = 0.0003, 0.0003, 0,
gq = 0.0003, 0.0003, 0,
if_ramping = 1,
dtramp_min = 60.0,
io_form_gfdda = 2,
/
&dynamics
w_damping = 0,
diff_opt = 2,
km_opt = 4,
hybrid_opt = 0,
etac = 0.2,
diff_6th_opt = 0, 0, 0, 0,
diff_6th_factor = 0.12, 0.12, 0.12, 0.12,
base_temp = 300.
damp_opt = 3,
zdamp = 5000., 5000., 5000., 5000.,
dampcoef = 0.2, 0.2, 0.2, 0.2,
khdif = 0, 0, 0, 0,
kvdif = 0, 0, 0, 0,
non_hydrostatic = .true., .true., .true., .true.,
moist_adv_opt = 1, 1, 1, 1,
scalar_adv_opt = 1, 1, 1, 1,
/
&bdy_control
spec_bdy_width = 5,
spec_zone = 1,
relax_zone = 4,
specified = .true., .false., .false., .false.,
nested = .false., .true., .true., .true.,
/
&grib2
/
&namelist_quilt
nio_tasks_per_group = 0,
nio_groups = 1,
! nio_tasks_per_group = 36,
! nio_groups = 12,
/