Missing references of netcdf-fortran ...

[miroilias]

Hello,

on my Ubuntu I have all netcdf packages installed, nc-config confirms it has gfortran installed, but still missing references of netcdf-fortran origin.

Maybe some wrong links generated by configure ?

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time mpif90  -w -ffree-form -ffree-line-length-none -fconvert=big-endian -frecord-marker=4      -c  -I/usr/include -I../ioapi_share diffwrf.f
0.08user 0.00system 0:00.09elapsed 98%CPU (0avgtext+0avgdata 36080maxresident)k
0inputs+344outputs (0major+6422minor)pagefaults 0swaps
diffwrf io_netcdf is being built now.
/usr/bin/ld: wrf_io.o: in function `__ext_ncd_support_routines_MOD_netcdf_err.part.0':
wrf_io.f:(.text+0x46): undefined reference to `nf_strerror_'
/usr/bin/ld: wrf_io.o: in function `__ext_ncd_support_routines_MOD_gettimeindex':
wrf_io.f:(.text+0x504d): undefined reference to `nf_put_vara_text_'
/usr/bin/ld: wrf_io.o: in function `ext_ncd_get_var_td_char_':
wrf_io.f:(.text+0xc40b): undefined reference to `nf_inq_varid_'
/usr/bin/ld: wrf_io.f:(.text+0xc45c): undefined reference to `nf_inq_var_'
/usr/bin/ld: wrf_io.f:(.text+0xca4a): undefined reference to `nf_inq_dimlen_'
/usr/bin/ld: wrf_io.f:(.text+0xcb16): undefined reference to `nf_get_vara_text_'
/usr/bin/ld: wrf_io.o: in function `ext_ncd_get_var_td_logical_':
wrf_io.f:(.text+0xd607): undefined reference to `nf_inq_varid_'
/usr/bin/ld: wrf_io.f:(.text+0xd657): undefined reference to `nf_inq_var_'
/usr/bin/ld: wrf_io.f:(.text+0xdd3d): undefined reference to `nf_inq_dimlen_'
/usr/bin/ld: wrf_io.f:(.text+0xde18): undefined reference to `nf_get_vara_int_'
/usr/bin/ld: wrf_io.o: in function `ext_ncd_get_var_td_double_':
wrf_io.f:(.text+0xec07): undefined reference to `nf_inq_varid_'
/usr/bin/ld: wrf_io.f:(.text+0xec57): undefined reference to `nf_inq_var_'
/usr/bin/ld: wrf_io.f:(.text+0xf33d): undefined reference to `nf_inq_dimlen_'
/usr/bin/ld: wrf_io.f:(.text+0xf415): undefined reference to `nf_get_vara_double_'
/usr/bin/ld: wrf_io.o: in function `ext_ncd_get_var_td_integer_':
wrf_io.f:(.text+0x10127): undefined reference to `nf_inq_varid_'
.
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[mgduda]

I've moved this topic to the WRF compilation section of the forum, since it looks like the question concerns WRF rather than MPAS-Atmosphere.

 

[kwerner]

Hi,
If you haven't done so already, please follow the instructions in our compilation tutorial to ensure all necessary libraries are installed correctly. If you are using separate netcdf-c and netcdf-fortran libraries, take a look at this FAQ that discusses the procedure for installing.